RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 C7orf57Q8NEG2 295 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 ACTRT2Q8TDY3 377 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 APOBEC4Q8WW27 367 aaKnown RBP9.71□□□□□ -0.86
PSMA4-207ENST00000558635 EXTL1Q92935 676 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 KLHL29Q96CT2 875 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 MAELQ96JY0 434 aaKnown RBP9.71□□□□□ -0.86
PSMA4-207ENST00000558635 IMMP1LQ96LU5 166 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 DGAT2Q96PD7 388 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 LPAR4Q99677 370 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 EBF4Q9BQW3 602 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 TUBB6Q9BUF5 446 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 TRIM55Q9BYV6 548 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 ING2Q9H160 280 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 NPHS2Q9NP85 383 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 ADAP2Q9NPF8 381 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 MIEF1Q9NQG6 463 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 FGFR1OP2Q9NVK5 253 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 ASIC5Q9NY37 505 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 FAM53CQ9NYF3 392 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 NOP53Q9NZM5 478 aaKnown RBP9.71□□□□□ -0.86
PSMA4-207ENST00000558635 EHD3Q9NZN3 535 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 UTS2RQ9UKP6 389 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 SCN2AQ99250 2005 aa9.71□□□□□ -0.86
PSMA4-207ENST00000558635 LOC400499M0QZD8 3231 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 SYNDIG1LA6NDD5 238 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 SAGE2PA6NJ88 616 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 POLR3GO15318 223 aaPredicted RBP9.7□□□□□ -0.86
PSMA4-207ENST00000558635 OR10H2O60403 315 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 DNAJB5O75953 348 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 ITGB2P05107 769 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 CELA2AP08217 269 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 ALDOCP09972 364 aaKnown RBP9.7□□□□□ -0.86
PSMA4-207ENST00000558635 SLC35E2P0CK97 266 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 CPMP14384 443 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 PORP16435 677 aaPredicted RBP9.7□□□□□ -0.86
PSMA4-207ENST00000558635 TNNI3P19429 210 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 CCL11P51671 97 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 PLIN5Q00G26 463 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 DUSP2Q05923 314 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 AIMP2Q13155 320 aaKnown RBP9.7□□□□□ -0.86
PSMA4-207ENST00000558635 PTGR1Q14914 329 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 ELAVL1Q15717 326 aaKnown RBP9.7□□□□□ -0.86
PSMA4-207ENST00000558635 BTBD16Q32M84 506 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 LSM12Q3MHD2 195 aaKnown RBP9.7□□□□□ -0.86
PSMA4-207ENST00000558635 TMEM198Q66K66 360 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 OGFOD2Q6N063 350 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 ANKRD26P1Q6NSI1 321 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 DGAT2L6Q6ZPD8 337 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 ACAD11Q709F0 780 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 APLFQ8IW19 511 aaPredicted RBP9.7□□□□□ -0.86
PSMA4-207ENST00000558635 ST13P4Q8IZP2 240 aaPredicted RBP9.7□□□□□ -0.86
PSMA4-207ENST00000558635 KRTCAP2Q8N6L1 136 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 NFAM1Q8NET5 270 aaPredicted RBP9.7□□□□□ -0.86
PSMA4-207ENST00000558635 CEP70Q8NHQ1 597 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 RFWD2Q8NHY2 731 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 DOK4Q8TEW6 326 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 PTPMT1Q8WUK0 201 aaPredicted RBP9.7□□□□□ -0.86
PSMA4-207ENST00000558635 EXOSC8Q96B26 276 aaKnown RBP9.7□□□□□ -0.86
PSMA4-207ENST00000558635 CNRIP1Q96F85 164 aaPredicted RBP9.7□□□□□ -0.86
PSMA4-207ENST00000558635 RBM18Q96H35 190 aaKnown RBP9.7□□□□□ -0.86
PSMA4-207ENST00000558635 ZNF681Q96N22 645 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 REEP4Q9H6H4 257 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 SLC35C2Q9NQQ7 365 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 TAS2R7Q9NYW3 318 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 DCTN4Q9UJW0 460 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 CLCA3PQ9Y6N3 262 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 ZNF780BQ9Y6R6 833 aa9.7□□□□□ -0.86
PSMA4-207ENST00000558635 A6NL46 340 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 GABRR3A8MPY1 467 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 C17orf105B2RV13 164 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 SCAMP2O15127 329 aaKnown RBP9.69□□□□□ -0.86
PSMA4-207ENST00000558635 TBX19O60806 448 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 SERPINA7P05543 415 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 FBXO45P0C2W1 286 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 VSIG8P0DPA2 414 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 ITGAMP11215 1152 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 ICAM2P13598 275 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 COX7A2P14406 83 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 CSNK2A2P19784 350 aaPredicted RBP9.69□□□□□ -0.86
PSMA4-207ENST00000558635 ITGA3P26006 1051 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 PTGER1P34995 402 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 PGDP52209 483 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 NME5P56597 212 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 CLDN8P56748 225 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 SLC26A5P58743 744 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 SF3A3Q12874 501 aaKnown RBP eCLIP9.69□□□□□ -0.86
PSMA4-207ENST00000558635 RAPSNQ13702 412 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 PDE7AQ13946 482 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 TERF2Q15554 542 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 EXT1Q16394 746 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 LINC00303Q3SY05 128 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 ZNF385BQ569K4 471 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 PLAG1Q6DJT9 500 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 CGB2Q6NT52 195 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 R3HCC1LQ7Z5L2 792 aaKnown RBP9.69□□□□□ -0.86
PSMA4-207ENST00000558635 RIMKLAQ8IXN7 391 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 KBTBD2Q8IY47 623 aa9.69□□□□□ -0.86
PSMA4-207ENST00000558635 SAMD14Q8IZD0 417 aaPredicted RBP9.69□□□□□ -0.86
PSMA4-207ENST00000558635 LRRC25Q8N386 305 aaPredicted RBP9.69□□□□□ -0.86
PSMA4-207ENST00000558635 GALNT16Q8N428 558 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms