RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CYP51A1Q16850 503 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 ZBED5Q49AG3 693 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 NKAIN1Q4KMZ8 207 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 ZC3H12BQ5HYM0 836 aaKnown RBP9.72□□□□□ -0.85
TPM1-212ENST00000558347 LIPJQ5W064 366 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 LETMD1Q6P1Q0 360 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 TTC33Q6PID6 262 aaPredicted RBP9.72□□□□□ -0.85
TPM1-212ENST00000558347 DHRS4L2Q6PKH6 230 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 LCTLQ6UWM7 567 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 RNF44Q7L0R7 432 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 FAM47BQ8NA70 645 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 OR8J3Q8NGG0 315 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 OR2Y1Q8NGV0 311 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 PNPT1Q8TCS8 783 aaKnown RBP9.72□□□□□ -0.85
TPM1-212ENST00000558347 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.72□□□□□ -0.85
TPM1-212ENST00000558347 WDR34Q96EX3 536 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 PPP3R2Q96LZ3 170 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 RDH12Q96NR8 316 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 CCDC115Q96NT0 180 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 PCBD2Q9H0N5 130 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 EHD1Q9H4M9 534 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 CLMPQ9H6B4 373 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 SYNPO2LQ9H987 977 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 ENAMQ9NRM1 1142 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 GMPR2Q9P2T1 348 aaKnown RBP9.72□□□□□ -0.85
TPM1-212ENST00000558347 NDOR1Q9UHB4 597 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 EGFL7Q9UHF1 273 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 GPN3Q9UHW5 284 aaPredicted RBP9.72□□□□□ -0.85
TPM1-212ENST00000558347 PADI2Q9Y2J8 665 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 TIMM22Q9Y584 194 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 KCNE2Q9Y6J6 123 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 FLNCQ14315 2725 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 COL12A1Q99715 3063 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 PCM1Q15154 2024 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 LOC105369274A0A096LPK9 316 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 IGKV1-8A0A0C4DH67 115 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 LOC102723532A0A0G2JNH3 316 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 RNF103-CHMP3A0A140T963 221 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 A0A1B0GX78 115 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 OR2A25A4D2G3 310 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 FITM1A5D6W6 292 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 H3BSA7 217 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 MASP2O00187 686 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 DSCR3O14972 297 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 PRAMEF4O60810 478 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 CEACAM4O75871 244 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 CLDN9O95484 217 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 UMODP07911 640 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 CMPK1P30085 196 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 HNF4AP41235 474 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 FOLR3P41439 243 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 ARSFP54793 590 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 NUP107P57740 925 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 VSX2P58304 361 aaPredicted RBP9.72□□□□□ -0.85
TPM1-212ENST00000558347 ZNF33BQ06732 778 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 PWP1Q13610 501 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 TSTA3Q13630 321 aaPredicted RBP9.72□□□□□ -0.85
TPM1-212ENST00000558347 SSPNQ14714 243 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 TCTE1Q5JU00 501 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 PAGE3Q5JUK9 113 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 PRAMEF9Q5VWM5 478 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 PRAMEF13Q5VWM6 474 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 NANOGP8Q6NSW7 305 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 COX15Q7KZN9 410 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 GPR141Q7Z602 305 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 MRGPREQ86SM8 312 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 PATL1Q86TB9 770 aaKnown RBP9.72□□□□□ -0.85
TPM1-212ENST00000558347 RAB43Q86YS6 212 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 OR4N4Q8N0Y3 316 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 DHRSXQ8N5I4 330 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 METTL27Q8N6F8 245 aaPredicted RBP9.72□□□□□ -0.85
TPM1-212ENST00000558347 CDYL2Q8N8U2 506 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 TEX19Q8NA77 164 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 FNDC5Q8NAU1 212 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 FDCSPQ8NFU4 85 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 OR52E4Q8NGH9 312 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 OR2T11Q8NH01 316 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 DNAJB8Q8NHS0 232 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 ZNF420Q8TAQ5 688 aaPredicted RBP9.72□□□□□ -0.85
TPM1-212ENST00000558347 METTL6Q8TCB7 284 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 NSMCE2Q96MF7 247 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 C17orf62Q9BQA9 187 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 DPH7Q9BTV6 452 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 BDH2Q9BUT1 245 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 NUDT9Q9BW91 350 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 ACTR8Q9H981 624 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 NANOGQ9H9S0 305 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 CUTCQ9NTM9 273 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 ASIC5Q9NY37 505 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 SMPD3Q9NY59 655 aaPredicted RBP9.72□□□□□ -0.85
TPM1-212ENST00000558347 TAC3Q9UHF0 121 aa9.72□□□□□ -0.85
TPM1-212ENST00000558347 PCDHGA9Q9Y5G4 932 aaKnown RBP9.72□□□□□ -0.85
TPM1-212ENST00000558347 KCNE1BA0A087WTH5 132 aa9.71□□□□□ -0.86
TPM1-212ENST00000558347 MYOCOSA0A1B0GUC4 107 aa9.71□□□□□ -0.86
TPM1-212ENST00000558347 SERTM1A2A2V5 107 aa9.71□□□□□ -0.86
TPM1-212ENST00000558347 A6NL46 340 aa9.71□□□□□ -0.86
TPM1-212ENST00000558347 SLC28A1O00337 649 aa9.71□□□□□ -0.86
TPM1-212ENST00000558347 PLOD2O00469 737 aa9.71□□□□□ -0.86
TPM1-212ENST00000558347 CLOCKO15516 846 aa9.71□□□□□ -0.86
TPM1-212ENST00000558347 SRPX2O60687 465 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms