RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 OR13C3Q8NGS6 347 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 GLYATL2Q8WU03 294 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 MALSU1Q96EH3 234 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 MDFIC2A0A1B0GVS7 189 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 SGCEO43556 437 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 LEFTY1O75610 366 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 SLC18A1P54219 525 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 GK2Q14410 553 aaPredicted RBP13.38□□□□□ -0.27
SPG11-210ENST00000558319 KCNJ11Q14654 390 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 EOGTQ5NDL2 527 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 ADGRF1Q5T601 910 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 NPAS3Q8IXF0 933 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 KCNN1Q92952 543 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 ZBTB20Q9HC78 741 aaPredicted RBP13.38□□□□□ -0.27
SPG11-210ENST00000558319 TXNRD2Q9NNW7 524 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 B3GAT2Q9NPZ5 323 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 GPR83Q9NYM4 423 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 INSL6Q9Y581 213 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 PAHP00439 452 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 SSTR4P31391 388 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 DESI1Q6ICB0 168 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 UGT2A3Q6UWM9 527 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 TMIGD2Q96BF3 282 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 BIRC8Q96P09 236 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 PSKH2Q96QS6 385 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 PBDC1Q9BVG4 233 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 LHPPQ9H008 270 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 SIX2Q9NPC8 291 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 OR6C65A6NJZ3 312 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 IRAK2O43187 625 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 RGS9O75916 674 aaPredicted RBP13.38□□□□□ -0.27
SPG11-210ENST00000558319 GSTM2P28161 218 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 SLC6A6P31641 620 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 ZNF136P52737 540 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 WDR45BQ5MNZ6 344 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 C6orf89Q6UWU4 347 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 GSG1LQ6UXU4 331 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 TSPAN33Q86UF1 283 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 ZUFSPQ96AP4 578 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 SLA2Q9H6Q3 261 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 SRA1Q9HD15 236 aaKnown RBP13.38□□□□□ -0.27
SPG11-210ENST00000558319 SERTAD3Q9UJW9 196 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 PCTPQ9UKL6 214 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 NPIPA2E9PIF3 369 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 NPIPA3F8WFD2 350 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 IFNA4P05014 189 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 ALDOBP05062 364 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 PTCHD3Q3KNS1 767 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 FLYWCH1Q4VC44 716 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 GPR34Q9UPC5 381 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 IGLV3-22A0A075B6J6 115 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 EDDM13A0A1B0GTR0 161 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 LCHNA4D1U4 455 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 FAM171A2A8MVW0 826 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 ADAP00813 363 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 PENKP01210 267 aaPredicted RBP13.37□□□□□ -0.27
SPG11-210ENST00000558319 DLDP09622 509 aaKnown RBP13.37□□□□□ -0.27
SPG11-210ENST00000558319 GLT8D1Q68CQ7 371 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 IGDCC3Q8IVU1 814 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 ZSCAN4Q8NAM6 433 aaPredicted RBP13.37□□□□□ -0.27
SPG11-210ENST00000558319 CAMKVQ8NCB2 501 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 HYLS1Q96M11 299 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 CAPNS1P04632 268 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 DIO3P55073 304 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 SQSTM1Q13501 440 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 ZNF776Q68DI1 518 aaPredicted RBP13.37□□□□□ -0.27
SPG11-210ENST00000558319 SHQ1Q6PI26 577 aaKnown RBP13.37□□□□□ -0.27
SPG11-210ENST00000558319 TRAPPC6BQ86SZ2 158 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 MGLLQ99685 303 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 CMKLR1Q99788 373 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 NSUN3Q9H649 340 aaKnown RBP13.37□□□□□ -0.27
SPG11-210ENST00000558319 STUB1Q9UNE7 303 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 C2orf78A6NCI8 922 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 SLC36A3Q495N2 470 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 ZNF572Q7Z3I7 529 aaPredicted RBP13.37□□□□□ -0.27
SPG11-210ENST00000558319 SLC9B2Q86UD5 537 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.37□□□□□ -0.273e-19■■■■□ 24.5
SPG11-210ENST00000558319 COPZ2Q9P299 210 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 ACSL5Q9ULC5 683 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 BRINP1O60477 761 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 SLC34A2O95436 690 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 IFNA1P01562 189 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 OPRL1P41146 370 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 HK3P52790 923 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 FGL1Q08830 312 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 MS4A13Q5J8X5 152 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 NPRL2Q8WTW4 380 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 CMTM7Q96FZ5 175 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 PTCHD1Q96NR3 888 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 NSUN5Q96P11 429 aaKnown RBP13.37□□□□□ -0.27
SPG11-210ENST00000558319 CD300AQ9UGN4 299 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 TEX264Q9Y6I9 313 aa13.37□□□□□ -0.27
SPG11-210ENST00000558319 DCKP27707 260 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 GRB7Q14451 532 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 NKX2-4Q9H2Z4 354 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 PRMT8Q9NR22 394 aaPredicted RBP13.36□□□□□ -0.27
SPG11-210ENST00000558319 DHDHQ9UQ10 334 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 PREX1Q8TCU6 1659 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 A0A0G2JMP0 313 aa13.36□□□□□ -0.27
SPG11-210ENST00000558319 TRBV2A0A0J9YWF9 115 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms