RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 MKL2Q9ULH7 1088 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 CFL2Q9Y281 166 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 L3MBTL1Q9Y468 752 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 GMEB1Q9Y692 573 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 SCN3AQ9NY46 2000 aa11.65□□□□□ -0.54
TPM1-209ENST00000558072 SPTBP11277 2137 aa11.65□□□□□ -0.55
TPM1-209ENST00000558072 A0A087WV62 115 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 GLOD5A6NK44 160 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 C9orf172C9J069 976 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 PLOD2O00469 737 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 SCN2BO60939 215 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 DNAJB6O75190 326 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 COQ9O75208 318 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 STAMBPO95630 424 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 CPSF4O95639 269 aaKnown RBP11.64□□□□□ -0.55
TPM1-209ENST00000558072 AGR2O95994 175 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 IFNA16P05015 189 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 T-ENOLP0DO92 83 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 TNNI3P19429 210 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 CHI3L1P36222 383 aaPredicted RBP11.64□□□□□ -0.55
TPM1-209ENST00000558072 FEN1P39748 380 aaKnown RBP11.64□□□□□ -0.55
TPM1-209ENST00000558072 WNT3P56703 355 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 AP2B1P63010 937 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 PSPHP78330 225 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 TP53BP2Q13625 1128 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 NCF4Q15080 339 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 ELAVL1Q15717 326 aaKnown RBP11.64□□□□□ -0.55
TPM1-209ENST00000558072 NSDHLQ15738 373 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 NKG7Q16617 165 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 CPZQ66K79 652 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 ANKRD26P1Q6NSI1 321 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 ZCCHC12Q6PEW1 402 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 SLC2A7Q6PXP3 512 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 CCDC116Q8IYX3 515 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 SLC38A9Q8NBW4 561 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 GALNT6Q8NCL4 622 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.64□□□□□ -0.55
TPM1-209ENST00000558072 POP5Q969H6 163 aaKnown RBP11.64□□□□□ -0.55
TPM1-209ENST00000558072 ANKRD9Q96BM1 317 aaPredicted RBP11.64□□□□□ -0.55
TPM1-209ENST00000558072 CNRIP1Q96F85 164 aaPredicted RBP11.64□□□□□ -0.55
TPM1-209ENST00000558072 SLC45A3Q96JT2 553 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 ZNF681Q96N22 645 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 IP6K3Q96PC2 410 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 RAB3IPQ96QF0 476 aaPredicted RBP11.64□□□□□ -0.55
TPM1-209ENST00000558072 CGREF1Q99674 301 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 NPAS2Q99743 824 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 SPRY4Q9C004 299 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 GLIPR2Q9H4G4 154 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 SPAG4Q9NPE6 437 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 ADAP2Q9NPF8 381 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 LANCL2Q9NS86 450 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.64□□□□□ -0.55
TPM1-209ENST00000558072 BCAP29Q9UHQ4 241 aa11.64□□□□□ -0.55
TPM1-209ENST00000558072 FER1L5A0AVI2 2057 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 TMEM247A6NEH6 219 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 CFAP73A6NFT4 308 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 CDRT15L2A8MXV6 281 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 C9JVG2 144 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 FAM227AF5H4B4 570 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 FBP2O00757 339 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 EMC8O43402 210 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 FGF17O60258 216 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 PLOD3O60568 738 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 DNAJC8O75937 253 aaPredicted RBP11.63□□□□□ -0.55
TPM1-209ENST00000558072 C6orf47O95873 294 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 C8orf89P0DMQ9 161 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 NT5EP21589 574 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 SLC5A2P31639 672 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 FOLR3P41439 243 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 PSME3P61289 254 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 MAP4K2Q12851 820 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 FADDQ13158 208 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 SYT16Q17RD7 645 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 ZNF385BQ569K4 471 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 PAGE3Q5JUK9 113 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 SAMD4BQ5PRF9 694 aaKnown RBP11.63□□□□□ -0.55
TPM1-209ENST00000558072 LCN10Q6JVE6 187 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 COX15Q7KZN9 410 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 GALNT12Q8IXK2 581 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 RBM15BQ8NDT2 890 aaKnown RBP11.63□□□□□ -0.55
TPM1-209ENST00000558072 OR7G1Q8NGA0 311 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 OR2Y1Q8NGV0 311 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 OR14A16Q8NHC5 309 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 RIT1Q92963 219 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 CIDECQ96AQ7 238 aaPredicted RBP11.63□□□□□ -0.55
TPM1-209ENST00000558072 ANKRD27Q96NW4 1050 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 CRB3Q9BUF7 120 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 SCNM1Q9BWG6 230 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 CHST8Q9H2A9 424 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 LRMDAQ9H2I8 198 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 TAS2R1Q9NYW7 299 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 MAP10Q9P2G4 905 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 C3orf18Q9UK00 162 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 WASF3Q9UPY6 502 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 FARSAQ9Y285 508 aaKnown RBP11.63□□□□□ -0.55
TPM1-209ENST00000558072 PCDHGB3Q9Y5G1 929 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 CLCA3PQ9Y6N3 262 aa11.63□□□□□ -0.55
TPM1-209ENST00000558072 CROCCQ5TZA2 2017 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 IGKV3D-11A0A0A0MRZ8 115 aa11.62□□□□□ -0.55
TPM1-209ENST00000558072 TCRBV16S1A1N1A0A5B0 115 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms