RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 SLC22A11Q9NSA0 550 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 SLC25A37Q9NYZ2 338 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 CTSFQ9UBX1 484 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 NXT1Q9UKK6 140 aaKnown RBP15.83■□□□□ 0.12
SNX1-203ENST00000558040 SNX8Q9Y5X2 465 aa15.83■□□□□ 0.12
SNX1-203ENST00000558040 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.83■□□□□ 0.12
SNX1-203ENST00000558040 A0A1W2PNU3 283 aaPredicted RBP15.82■□□□□ 0.12
SNX1-203ENST00000558040 C9orf172C9J069 976 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 DNAJA2O60884 412 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 JRKO75564 520 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 TNFSF15O95150 251 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 KRT75O95678 551 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 CYC1P08574 325 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 CD63P08962 238 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 ZGLP1P0C6A0 271 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 CCNYL3P0C7X3 344 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 MAOAP21397 527 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 CHI3L1P36222 383 aaPredicted RBP15.82■□□□□ 0.12
SNX1-203ENST00000558040 CDK9P50750 372 aaKnown RBP15.82■□□□□ 0.12
SNX1-203ENST00000558040 BTG2P78543 158 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 SPATS1Q496A3 300 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 GTDC1Q4AE62 458 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 VWA2Q5GFL6 755 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 SAMD4BQ5PRF9 694 aaKnown RBP15.82■□□□□ 0.12
SNX1-203ENST00000558040 CPZQ66K79 652 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 BHLHB9Q6PI77 547 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 C6orf15Q6UXA7 325 aaPredicted RBP15.82■□□□□ 0.12
SNX1-203ENST00000558040 TMEM64Q6YI46 380 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 MSRB3Q8IXL7 192 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 ST13P4Q8IZP2 240 aaPredicted RBP15.82■□□□□ 0.12
SNX1-203ENST00000558040 GALNT6Q8NCL4 622 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 OR9A2Q8NGT5 310 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 STT3BQ8TCJ2 826 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 SFXN5Q8TD22 340 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 RBM18Q96H35 190 aaKnown RBP15.82■□□□□ 0.12
SNX1-203ENST00000558040 PTCHD1Q96NR3 888 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 DGAT2Q96PD7 388 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 CPPED1Q9BRF8 314 aaPredicted RBP15.82■□□□□ 0.12
SNX1-203ENST00000558040 THUMPD3Q9BV44 507 aaKnown RBP15.82■□□□□ 0.12
SNX1-203ENST00000558040 ALOXE3Q9BYJ1 711 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 RAD21L1Q9H4I0 556 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 CXorf36Q9H7Y0 433 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 WDR54Q9H977 334 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 POLR1BQ9H9Y6 1135 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 C3orf14Q9HBI5 128 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 SLC6A13Q9NSD5 602 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 TMEM181Q9P2C4 612 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 ABCD2Q9UBJ2 740 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 GMEB1Q9Y692 573 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 CROCCQ5TZA2 2017 aa15.82■□□□□ 0.12
SNX1-203ENST00000558040 RNF103-CHMP3A0A140T963 221 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 A0A1W2PS29 197 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 PMS2P1A4D2B8 440 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 FAM149AA5PLN7 773 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 FAM186AA6NE01 2351 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 VSTM2BA6NLU5 285 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 CLIC1O00299 241 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 DLGAP3O95886 979 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 IFI6P09912 130 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 NT5EP21589 574 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 GALNSP34059 522 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 STT3AP46977 705 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 PRR5P85299 388 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 RHAGQ02094 409 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 DUSP2Q05923 314 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 GAB1Q13480 694 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 MAP7Q14244 749 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 NUP210LQ5VU65 1888 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 MLIPQ5VWP3 458 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 TMPRSS7Q7RTY8 843 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 SLC15A3Q8IY34 581 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 OR56A1Q8NGH5 318 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 ZNF675Q8TD23 568 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 ZFP90Q8TF47 636 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 TMEM125Q96AQ2 219 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 ZFHX2Q9C0A1 2572 aaPredicted RBP15.81■□□□□ 0.12
SNX1-203ENST00000558040 TPT1P8Q9HAU6 139 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 SIRT3Q9NTG7 399 aaPredicted RBP15.81■□□□□ 0.12
SNX1-203ENST00000558040 PTGFRNQ9P2B2 879 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 PADI1Q9ULC6 663 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 MKL2Q9ULH7 1088 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 ERVK-11Q9UQG0 969 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 NEUROG3Q9Y4Z2 214 aa15.81■□□□□ 0.12
SNX1-203ENST00000558040 KIF26BQ2KJY2 2108 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 IGKV3D-11A0A0A0MRZ8 115 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 PLOD2O00469 737 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 EMC8O43402 210 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 DYRK3O43781 588 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 IFNA16P05015 189 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 HEXBP07686 556 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 NQO1P15559 274 aaKnown RBP15.8■□□□□ 0.12
SNX1-203ENST00000558040 RBMS1P29558 406 aaKnown RBP15.8■□□□□ 0.12
SNX1-203ENST00000558040 CCT3P49368 545 aaKnown RBP15.8■□□□□ 0.12
SNX1-203ENST00000558040 EEFSECP57772 596 aaKnown RBP15.8■□□□□ 0.12
SNX1-203ENST00000558040 MTPNP58546 118 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 KCNJ2P63252 427 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 GABREP78334 506 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 VAC14Q08AM6 782 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 NKG7Q16617 165 aa15.8■□□□□ 0.12
SNX1-203ENST00000558040 RABL3Q5HYI8 236 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms