RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 TRPC4APQ8TEL6 797 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 FBXL20Q96IG2 436 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 FRMD6Q96NE9 622 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 SIGLEC12Q96PQ1 595 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 CSF3RQ99062 836 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 NPAS2Q99743 824 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 ERVK-6Q9BXR3 956 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 SHCBP1LQ9BZQ2 653 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 OR8D2Q9GZM6 311 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 ANKRD10Q9NXR5 420 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 TRPS1Q9UHF7 1281 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 MID2Q9UJV3 735 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 PSME2Q9UL46 239 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 RNF11Q9Y3C5 154 aa10.61□□□□□ -0.71
LINC00648-204ENST00000557749 A0A0A6YYD5 115 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 TRGV8A0A0C4DH27 118 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 GOLGA6L10A6NI86 522 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 CAPN14A8MX76 684 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 SAP18O00422 153 aaKnown RBP10.6□□□□□ -0.71
LINC00648-204ENST00000557749 RTCAO00442 366 aaKnown RBP10.6□□□□□ -0.71
LINC00648-204ENST00000557749 OR7A17O14581 309 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 EREGO14944 169 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 TFECO14948 347 aaPredicted RBP10.6□□□□□ -0.71
LINC00648-204ENST00000557749 PROM1O43490 865 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 SLC19A2O60779 497 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 LDB3O75112 727 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 GLRA3O75311 464 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 GPR75O95800 540 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 RHOXF2BP0C7M4 288 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 ATP5F1P24539 256 aaPredicted RBP10.6□□□□□ -0.71
LINC00648-204ENST00000557749 TNFRSF8P28908 595 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 CA7P43166 264 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 GSTM5P46439 218 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 HNRNPFP52597 415 aaKnown RBP10.6□□□□□ -0.71
LINC00648-204ENST00000557749 SMSP52788 366 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 RNF4P78317 190 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 SPRED3Q2MJR0 410 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 MRM1Q6IN84 353 aaKnown RBP10.6□□□□□ -0.71
LINC00648-204ENST00000557749 RTL4Q6ZR62 310 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 SLC29A4Q7RTT9 530 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 SAMD14Q8IZD0 417 aaPredicted RBP10.6□□□□□ -0.71
LINC00648-204ENST00000557749 GBP7Q8N8V2 638 aaPredicted RBP10.6□□□□□ -0.71
LINC00648-204ENST00000557749 PTPMT1Q8WUK0 201 aaPredicted RBP10.6□□□□□ -0.71
LINC00648-204ENST00000557749 RHOXF2Q9BQY4 288 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 FAIM2Q9BWQ8 316 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 FRRS1LQ9P0K9 344 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 CFL2Q9Y281 166 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 CLDN16Q9Y5I7 305 aa10.6□□□□□ -0.71
LINC00648-204ENST00000557749 ICE1Q9Y2F5 2266 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 C1orf226A1L170 272 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 A8MT66 165 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 PRRG2O14669 202 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 FGF17O60258 216 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 OR2J2O76002 312 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 SUPT7LO94864 414 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 ENO1P06733 434 aaKnown RBP10.59□□□□□ -0.71
LINC00648-204ENST00000557749 SLC35E2P0CK97 266 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 ESRRAP11474 423 aaPredicted RBP10.59□□□□□ -0.71
LINC00648-204ENST00000557749 ABOP16442 354 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 AGAP20933 346 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 PIK3R1P27986 724 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 BSGP35613 385 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 CCT5P48643 541 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 TMED10P49755 219 aaKnown RBP10.59□□□□□ -0.71
LINC00648-204ENST00000557749 MAPK12P53778 367 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 PKNOX1P55347 436 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 TRA2BP62995 288 aaKnown RBP10.59□□□□□ -0.71
LINC00648-204ENST00000557749 RPP38P78345 283 aaKnown RBP10.59□□□□□ -0.71
LINC00648-204ENST00000557749 FOLH1Q04609 750 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 CSTF3Q12996 717 aaKnown RBP10.59□□□□□ -0.71
LINC00648-204ENST00000557749 TRAF3Q13114 568 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 SLC29A2Q14542 456 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 CCDC153Q494R4 210 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 TEX35Q5T0J7 233 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 CCNYL2Q5T2Q4 361 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 NDUFAF5Q5TEU4 345 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 RNF111Q6ZNA4 994 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.59□□□□□ -0.71
LINC00648-204ENST00000557749 SLC22A16Q86VW1 577 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 TAGAPQ8N103 731 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 PSD4Q8NDX1 1056 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 TMEM52Q8NDY8 209 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 OR4F6Q8NGB9 312 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 OR52B6Q8NGF0 335 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 UHMK1Q8TAS1 419 aaKnown RBP10.59□□□□□ -0.71
LINC00648-204ENST00000557749 RDH11Q8TC12 318 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 ZNF483Q8TF39 744 aaPredicted RBP10.59□□□□□ -0.71
LINC00648-204ENST00000557749 SELENOMQ8WWX9 145 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 RIT1Q92963 219 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 ANKRD9Q96BM1 317 aaPredicted RBP10.59□□□□□ -0.71
LINC00648-204ENST00000557749 CITED4Q96RK1 184 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 ZNF382Q96SR6 550 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 L2HGDHQ9H9P8 463 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 SEMA4BQ9NPR2 832 aaPredicted RBP10.59□□□□□ -0.71
LINC00648-204ENST00000557749 ATG4BQ9Y4P1 393 aa10.59□□□□□ -0.71
LINC00648-204ENST00000557749 KLF2Q9Y5W3 355 aaPredicted RBP10.59□□□□□ -0.71
LINC00648-204ENST00000557749 DIDO1Q9BTC0 2240 aaKnown RBP10.58□□□□□ -0.72
LINC00648-204ENST00000557749 NPIPA5E9PKD4 350 aa10.58□□□□□ -0.72
LINC00648-204ENST00000557749 NDUFB5O43674 189 aa10.58□□□□□ -0.72
LINC00648-204ENST00000557749 ASNA1O43681 348 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms