RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 PRKCZQ05513 592 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 TATDN3Q17R31 274 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 C3orf38Q5JPI3 329 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 FAM209AQ5JX71 171 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 SLC25A30Q5SVS4 291 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 ZNF730Q6ZMV8 503 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 HTR3DQ70Z44 454 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 IQCF1Q8N6M8 205 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 CELF5Q8N6W0 485 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 RASGEF1AQ8N9B8 481 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 NEURL3Q96EH8 262 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 ZC3HAV1LQ96H79 300 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 ZNF354BQ96LW1 612 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 KATNB1Q9BVA0 655 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 TAAR2Q9P1P5 351 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 TESQ9UGI8 421 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 NDRG2Q9UN36 371 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 SH2B3Q9UQQ2 575 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 IRGMA1A4Y4 181 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 ANKDD1BA6NHY2 528 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 ZNF780AO75290 641 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 SEMA7AO75326 666 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 NME6O75414 186 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 MYCP01106 439 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 URODP06132 367 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 CHRM5P08912 532 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 PRKAR1AP10644 381 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 DDX5P17844 614 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 PRLHRP49683 370 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 RPS25P62851 125 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 RPS26P62854 115 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 COX10Q12887 443 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 ZNF284Q2VY69 593 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 CRTC2Q53ET0 693 aaPredicted RBP11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 SYT14P1Q58G82 188 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 CST9Q5W186 159 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 BRAT1Q6PJG6 821 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 PAMR1Q6UXH9 720 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 TMIGD1Q6UXZ0 262 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 LRR1Q96L50 414 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 PRRG3Q9BZD7 231 aa11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 RBFOX1Q9NWB1 397 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-211ENST00000557658 GRM6O15303 877 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 C1orf105O95561 183 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 HLA-DQB1P01920 261 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 C1QBP02746 253 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 TP53P04637 393 aaPredicted RBP11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 PSKH1P11801 424 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 PDHA2P29803 388 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 PBLDP30039 288 aaPredicted RBP11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 KCNJ5P48544 419 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 MAN2A2P49641 1150 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 P2RX3P56373 397 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 GPLD1P80108 840 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 TPBGQ13641 420 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 GINS1Q14691 196 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 NDUFA9Q16795 377 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 HENMT1Q5T8I9 393 aaKnown RBP11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 QSOX2Q6ZRP7 698 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 Q6ZVU0 165 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 PDZD3Q86UT5 571 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 RBM45Q8IUH3 476 aaKnown RBP11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 CMTM8Q8IZV2 173 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 Q8N402 240 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 ANGPTL6Q8NI99 470 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 SLC7A13Q8TCU3 470 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 SLC5A11Q8WWX8 675 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 UFD1Q92890 307 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 MED30Q96HR3 178 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 ZNF582Q96NG8 517 aaPredicted RBP11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 ZNF607Q96SK3 696 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 ISYNA1Q9NPH2 558 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 ZSCAN32Q9NX65 697 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 ING3Q9NXR8 418 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 YARS2Q9Y2Z4 477 aaKnown RBP11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 ALG5Q9Y673 324 aa11.21□□□□□ -0.61
VIPAS39-211ENST00000557658 KIF26AQ9ULI4 1882 aaPredicted RBP11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 SMIM30A4D0T7 59 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 ACADMP11310 421 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 ELNP15502 786 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 APEX1P27695 318 aaKnown RBP11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 HLA-FP30511 346 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 OPRD1P41143 372 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 MEF2AQ02078 507 aaPredicted RBP11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 CNTN1Q12860 1018 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 TNK1Q13470 666 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 MADCAM1Q13477 382 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 FLYWCH1Q4VC44 716 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 METAP1DQ6UB28 335 aaPredicted RBP11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 NXPE4Q6UWF7 544 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 MMP21Q8N119 569 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 FBXO15Q8NCQ5 510 aaPredicted RBP11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 DUSP18Q8NEJ0 188 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 NLGN4YQ8NFZ3 816 aaPredicted RBP11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 OR52P1PQ8NH57 321 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 OR5P2Q8WZ92 322 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 UBE2E3Q969T4 207 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 IGSF21Q96ID5 467 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 LMLNQ96KR4 655 aa11.21□□□□□ -0.62
VIPAS39-211ENST00000557658 SGPP1Q9BX95 441 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms