RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 ANKRD28O15084 1053 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 PDPK1O15530 556 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 ERAL1O75616 437 aaKnown RBP13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 SERPINA7P05543 415 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 ALDOCP09972 364 aaKnown RBP13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 ATXN8OSP0DMR3 200 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 EFNA3P52797 238 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 PSPHP78330 225 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 RHDQ02161 417 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 MAP4K2Q12851 820 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 SRSF6Q13247 344 aaKnown RBP13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 ANXA8L1Q5VT79 327 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 BORAQ6PGQ7 559 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 MSANTD1Q6ZTZ1 278 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 GPR155Q7Z3F1 870 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 CPLX4Q7Z7G2 160 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 HPS6Q86YV9 775 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 GALNT12Q8IXK2 581 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 KBTBD2Q8IY47 623 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 LGI4Q8N135 537 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 MIER2Q8N344 545 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 OR7G1Q8NGA0 311 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 RIT1Q92963 219 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 CNRIP1Q96F85 164 aaPredicted RBP13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 VMP1Q96GC9 406 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 FBXL20Q96IG2 436 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 RILPQ96NA2 401 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 WDR77Q9BQA1 342 aaPredicted RBP13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 SEMA4CQ9C0C4 833 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 PRORYQ9H606 182 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 CLMPQ9H6B4 373 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 CXorf21Q9HAI6 301 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 KCNK13Q9HB14 408 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 NEUROD4Q9HD90 331 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 SH3BP4Q9P0V3 963 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 COPS7AQ9UBW8 275 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 GIMAP2Q9UG22 337 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 BAIAP2L1Q9UHR4 511 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 DCTN4Q9UJW0 460 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 EXO1Q9UQ84 846 aaKnown RBP13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 KCNMB2Q9Y691 235 aa13.19□□□□□ -0.3
SUPT16H-208ENST00000557652 A0A087WV62 115 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 OR6C76A6NM76 312 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 GABRR3A8MPY1 467 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 C17orf105B2RV13 164 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 E9PBE3 544 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 TGFBR3LH3BV60 316 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 SLC22A2O15244 555 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 SHOX2O60902 331 aaPredicted RBP13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 SLC22A3O75751 556 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 IL6P05231 212 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 PRKAR1AP10644 381 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 TNNI3P19429 210 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 KIR3DL1P43629 444 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 CLCN2P51788 898 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 SLC26A5P58743 744 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 CXADRP78310 365 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 EEF1A2Q05639 463 aaKnown RBP13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 COL9A2Q14055 689 aaPredicted RBP13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 SQLEQ14534 574 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 ST3GAL2Q16842 350 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 FAAH2Q6GMR7 532 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 OR1N1Q8NGS0 311 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 TSPEARQ8WU66 669 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 EXOSC8Q96B26 276 aaKnown RBP13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 EBF4Q9BQW3 602 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 TMEM120AQ9BXJ8 343 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 ING2Q9H160 280 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 EPN3Q9H201 632 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 ADNPQ9H2P0 1102 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 CPNE5Q9HCH3 593 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 PNO1Q9NRX1 252 aaKnown RBP13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 FAM120CQ9NX05 1096 aaKnown RBP13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 TEKT2Q9UIF3 430 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 TUBD1Q9UJT1 453 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 ADAM21Q9UKJ8 722 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 PCDHGA9Q9Y5G4 932 aaKnown RBP13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 ASPMQ8IZT6 3477 aa13.18□□□□□ -0.3
SUPT16H-208ENST00000557652 TTC36A6NLP5 189 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 PLOD2O00469 737 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 RNASET2O00584 256 aaKnown RBP13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 AKAP10O43572 662 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 PLOD3O60568 738 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 PRKRAO75569 313 aaKnown RBP13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 CEACAM4O75871 244 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 SOX30O94993 753 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 GPR143P51810 404 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 FUT7Q11130 342 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 CHAF1BQ13112 559 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 DEFB109BQ30KR1 87 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 BTBD16Q32M84 506 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 FAM69BQ5VUD6 431 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 SPATA21Q7Z572 469 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 OR4N5Q8IXE1 308 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 ARMC10Q8N2F6 343 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 VWA5B2Q8N398 1253 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 NFAM1Q8NET5 270 aaPredicted RBP13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 OR5L2Q8NGL0 311 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 CLHC1Q8NHS4 586 aa13.17□□□□□ -0.3
SUPT16H-208ENST00000557652 RFWD2Q8NHY2 731 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms