RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SWT1Q5T5J6 900 aaKnown RBP11.75□□□□□ -0.53
SHMT2-233ENST00000557529 TNFAIP8L2Q6P589 184 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-233ENST00000557529 SLC23A3Q6PIS1 610 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 SZRD1Q7Z422 152 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 SPRED1Q7Z699 444 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 GATAD2AQ86YP4 633 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 GALNT4Q8N4A0 578 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 HORMAD2Q8N7B1 307 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 ZBTB44Q8NCP5 570 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 OR9A4Q8NGU2 314 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 MIPOL1Q8TD10 442 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 LZICQ8WZA0 190 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 TBC1D20Q96BZ9 403 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 ELP4Q96EB1 424 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 VPS50Q96JG6 964 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 HSH2DQ96JZ2 352 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 CIB1Q99828 191 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 DOHHQ9BU89 302 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 TMEM121BQ9BXQ6 578 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-233ENST00000557529 BAG5Q9UL15 447 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 RAB26Q9ULW5 256 aa11.75□□□□□ -0.53
SHMT2-233ENST00000557529 MRPS33Q9Y291 106 aaKnown RBP11.75□□□□□ -0.53
SHMT2-233ENST00000557529 A0A0A6YYC8 382 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-233ENST00000557529 I3L1I5 382 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-233ENST00000557529 PLOD2O00469 737 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 GNGT2O14610 69 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 CHST10O43529 356 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 SIGLEC6O43699 453 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 DNAJB6O75190 326 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 RDH16O75452 317 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 RASAL1O95294 804 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 BMP10O95393 424 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 GPR75O95800 540 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 SEMG1P04279 462 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 FABP3P05413 133 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 CTSBP07858 339 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 SYPP08247 313 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 TFPTP0C1Z6 253 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 MSL3P1P0C860 447 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 SP9P0CG40 484 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 CKMT2P17540 419 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 MATN1P21941 496 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 AQP1P29972 269 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 CSF2RBP32927 897 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 CLCN2P51788 898 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 PCBP3P57721 371 aaKnown RBP11.74□□□□□ -0.53
SHMT2-233ENST00000557529 RPS26P62854 115 aaKnown RBP11.74□□□□□ -0.53
SHMT2-233ENST00000557529 SELENOWP63302 87 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 CFHR1Q03591 330 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 DUSP2Q05923 314 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 MYBPC3Q14896 1274 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 FAM214AQ32MH5 1076 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 TMEM107Q6UX40 140 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 BMP8AQ7Z5Y6 402 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 ZDHHC21Q8IVQ6 265 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 SVOPLQ8N434 492 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 D2HGDHQ8N465 521 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 CBR4Q8N4T8 237 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 OR5T3Q8NGG3 340 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 OR9A2Q8NGT5 310 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 NAT6Q93015 286 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 SDCCAG3Q96C92 435 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 SLC41A2Q96JW4 573 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 ZNF597Q96LX8 424 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 OR51I1Q9H343 314 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 IL1RAPQ9NPH3 570 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 NTMQ9P121 344 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 PTGFRNQ9P2B2 879 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 P2RX2Q9UBL9 471 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 TRPC4Q9UBN4 977 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 ZNF639Q9UID6 485 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 OAZ3Q9UMX2 235 aa11.74□□□□□ -0.53
SHMT2-233ENST00000557529 SDK1Q7Z5N4 2213 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 H0YIG0 161 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 M0QX08 132 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 HMGN4O00479 90 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 ARHGAP33O14559 1287 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 FOXS1O43638 330 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 ASNA1O43681 348 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 GCM2O75603 506 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-233ENST00000557529 ATP1B1P05026 303 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 RPSAP08865 295 aaKnown RBP11.73□□□□□ -0.53
SHMT2-233ENST00000557529 ZNF23P17027 643 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 MC3RP41968 323 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 MAPK10P53779 464 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 PRKAG1P54619 331 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 FOLH1Q04609 750 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 MED21Q13503 144 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 GPR19Q15760 415 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 TRIM61Q5EBN2 209 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 PIWIL3Q7Z3Z3 882 aaKnown RBP11.73□□□□□ -0.53
SHMT2-233ENST00000557529 GALNT10Q86SR1 603 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 NUP43Q8NFH3 380 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 SLC38A5Q8WUX1 472 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 TMBIM1Q969X1 311 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 TPD52L3Q96J77 140 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 MAGED4Q96JG8 741 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 ZNF607Q96SK3 696 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 SLC29A1Q99808 456 aa11.73□□□□□ -0.53
SHMT2-233ENST00000557529 DPYSL5Q9BPU6 564 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms