RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 TMEM178AQ8NBL3 297 aa7.77□□□□□ -1.17
PSEN1-223ENST00000557511 TMEM52Q8NDY8 209 aa7.77□□□□□ -1.17
PSEN1-223ENST00000557511 CDC26Q8NHZ8 85 aa7.77□□□□□ -1.17
PSEN1-223ENST00000557511 ELP5Q8TE02 316 aa7.77□□□□□ -1.17
PSEN1-223ENST00000557511 RIT1Q92963 219 aa7.77□□□□□ -1.17
PSEN1-223ENST00000557511 NCLNQ969V3 563 aa7.77□□□□□ -1.17
PSEN1-223ENST00000557511 METTL2AQ96IZ6 378 aaKnown RBP7.77□□□□□ -1.17
PSEN1-223ENST00000557511 KCNA7Q96RP8 456 aa7.77□□□□□ -1.17
PSEN1-223ENST00000557511 CNPPD1Q9BV87 410 aa7.77□□□□□ -1.17
PSEN1-223ENST00000557511 TRIM4Q9C037 500 aa7.77□□□□□ -1.17
PSEN1-223ENST00000557511 MIEF1Q9NQG6 463 aa7.77□□□□□ -1.17
PSEN1-223ENST00000557511 ERVK-11Q9UQG0 969 aa7.77□□□□□ -1.17
PSEN1-223ENST00000557511 ENTPD4Q9Y227 616 aa7.77□□□□□ -1.17
PSEN1-223ENST00000557511 ASB4Q9Y574 426 aa7.77□□□□□ -1.17
PSEN1-223ENST00000557511 CFAP47Q6ZTR5 3102 aa7.77□□□□□ -1.17
PSEN1-223ENST00000557511 FER1L5A0AVI2 2057 aa7.77□□□□□ -1.17
PSEN1-223ENST00000557511 SCN3AQ9NY46 2000 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 A0A1B0GTL3 188 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 MYOCOSA0A1B0GUC4 107 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 WDR91A4D1P6 747 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 BIRC5O15392 142 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 TYROBPO43914 113 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 PRAMEF2O60811 474 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 SEC22BO75396 215 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 RSL1D1O76021 490 aaKnown RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 WISP1O95388 367 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 F10P00742 488 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 CRYABP02511 175 aaKnown RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 ANXA4P09525 319 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 FAM157BP0CG42 384 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 SLC35E2P0CK97 266 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 PORP16435 677 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 CSNK2A2P19784 350 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 CD33P20138 364 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 GRK2P25098 689 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 MAPK1P28482 360 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 TPP2P29144 1249 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 SERPINB3P29508 390 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 TIA1P31483 386 aaKnown RBP eCLIP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 GALNSP34059 522 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 HTR6P50406 440 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 TNFSF10P50591 281 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 SSR4P51571 173 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 XKP51811 444 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 EFNA3P52797 238 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 TBL3Q12788 808 aaKnown RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 ZNF267Q14586 743 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 SWI5Q1ZZU3 235 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 PLEKHN1Q494U1 663 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 ARL13AQ5H913 290 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 ZNF766Q5HY98 468 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 SH2D4BQ5SQS7 431 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 BEND6Q5SZJ8 279 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 SAMD5Q5TGI4 173 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 H3F3CQ6NXT2 135 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 RNF111Q6ZNA4 994 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 EXOC3L1Q86VI1 746 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 TRIM42Q8IWZ5 723 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 GALNT12Q8IXK2 581 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 SHISA5Q8N114 240 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 BEST3Q8N1M1 668 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 KIF2BQ8N4N8 673 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 CISD2Q8N5K1 135 aaKnown RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 BCORP1Q8N888 145 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 ANKRD42Q8N9B4 389 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 NFAM1Q8NET5 270 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 OR8K3Q8NH51 312 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 FAM76AQ8TAV0 307 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 SLC22A8Q8TCC7 542 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 SLC2A12Q8TD20 617 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 THAP3Q8WTV1 239 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 CHTF18Q8WVB6 975 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 PSMF1Q92530 271 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 ANKRD9Q96BM1 317 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 KLHL29Q96CT2 875 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 CCT7Q99832 543 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 MECRQ9BV79 373 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 ACPTQ9BZG2 426 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 ACBD3Q9H3P7 528 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 LRTM1Q9HBL6 345 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 ZBTB20Q9HC78 741 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 LRFN1Q9P244 771 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 ZNF225Q9UK10 706 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 CFL2Q9Y281 166 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 WBP11Q9Y2W2 641 aaKnown RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 YARS2Q9Y2Z4 477 aaKnown RBP7.76□□□□□ -1.17
PSEN1-223ENST00000557511 TRAF6Q9Y4K3 522 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 PCDHA9Q9Y5H5 950 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 MGAQ8IWI9 3026 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 NBEAQ8NFP9 2946 aa7.76□□□□□ -1.17
PSEN1-223ENST00000557511 PIEZO2Q9H5I5 2752 aa7.75□□□□□ -1.17
PSEN1-223ENST00000557511 OR6C76A6NM76 312 aa7.75□□□□□ -1.17
PSEN1-223ENST00000557511 A8MVJ9 347 aa7.75□□□□□ -1.17
PSEN1-223ENST00000557511 CAPN14A8MX76 684 aa7.75□□□□□ -1.17
PSEN1-223ENST00000557511 TMEM114B3SHH9 223 aa7.75□□□□□ -1.17
PSEN1-223ENST00000557511 UBFD1O14562 309 aaKnown RBP7.75□□□□□ -1.17
PSEN1-223ENST00000557511 PRKRAO75569 313 aaKnown RBP7.75□□□□□ -1.17
PSEN1-223ENST00000557511 ITGA10O75578 1167 aa7.75□□□□□ -1.17
PSEN1-223ENST00000557511 SORBS2O94875 1100 aaKnown RBP7.75□□□□□ -1.17
PSEN1-223ENST00000557511 RASAL1O95294 804 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms