RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 UCN3Q969E3 161 aa11.61□□□□□ -0.55
SLIRP-209ENST00000557342 KLHL29Q96CT2 875 aa11.61□□□□□ -0.55
SLIRP-209ENST00000557342 C11orf24Q96F05 449 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-209ENST00000557342 CNPPD1Q9BV87 410 aa11.61□□□□□ -0.55
SLIRP-209ENST00000557342 TRIM45Q9H8W5 580 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-209ENST00000557342 ASF1BQ9NVP2 202 aa11.61□□□□□ -0.55
SLIRP-209ENST00000557342 ANKRD10Q9NXR5 420 aa11.61□□□□□ -0.55
SLIRP-209ENST00000557342 MYOTQ9UBF9 498 aa11.61□□□□□ -0.55
SLIRP-209ENST00000557342 CES1P1Q9UKY3 287 aa11.61□□□□□ -0.55
SLIRP-209ENST00000557342 DLGAP4Q9Y2H0 992 aa11.61□□□□□ -0.55
SLIRP-209ENST00000557342 TRAF6Q9Y4K3 522 aa11.61□□□□□ -0.55
SLIRP-209ENST00000557342 OR6C76A6NM76 312 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 PYCARD-AS1I3L0S3 204 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 SEC22BO75396 215 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 ERAL1O75616 437 aaKnown RBP11.6□□□□□ -0.55
SLIRP-209ENST00000557342 RASAL1O95294 804 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 CRYABP02511 175 aaKnown RBP11.6□□□□□ -0.55
SLIRP-209ENST00000557342 IGKV3-11P04433 115 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 IL3P08700 152 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 DHRS4L1P0CG22 281 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 NT5EP21589 574 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 SSR4P51571 173 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 HK2P52789 917 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 ERVK-8P63133 956 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 ZNF267Q14586 743 aaPredicted RBP11.6□□□□□ -0.55
SLIRP-209ENST00000557342 SH2D4BQ5SQS7 431 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 SPINK14Q6IE38 97 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 RNF111Q6ZNA4 994 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 DGAT2L6Q6ZPD8 337 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 SLC29A4Q7RTT9 530 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 GALNT12Q8IXK2 581 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 BCORP1Q8N888 145 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 ZNF321PQ8N8H1 164 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 FAM98AQ8NCA5 519 aaKnown RBP11.6□□□□□ -0.55
SLIRP-209ENST00000557342 OR6Y1Q8NGX8 325 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 DNAJB8Q8NHS0 232 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 TWIST2Q8WVJ9 160 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 ASB15Q8WXK1 588 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 TMEM125Q96AQ2 219 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 C19orf60Q96EN9 201 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 SCMH1Q96GD3 660 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 SIGLEC12Q96PQ1 595 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 BARD1Q99728 777 aaKnown RBP11.6□□□□□ -0.55
SLIRP-209ENST00000557342 CCT7Q99832 543 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 EBPLQ9BY08 206 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 CXorf21Q9HAI6 301 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 LRTM1Q9HBL6 345 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 TMBIM4Q9HC24 238 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 PFDN4Q9NQP4 134 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 GIMAP4Q9NUV9 329 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 C1orf109Q9NX04 203 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 EHD3Q9NZN3 535 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 UTS2RQ9UKP6 389 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 ERVK-19Q9WJR5 959 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 CCL27Q9Y4X3 112 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 DNAJC15Q9Y5T4 150 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 ZNF462Q96JM2 2506 aa11.6□□□□□ -0.55
SLIRP-209ENST00000557342 EML6Q6ZMW3 1958 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 WDR91A4D1P6 747 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 A8MVJ9 347 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 TMEM114B3SHH9 223 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 PRKNO60260 465 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-209ENST00000557342 SLC25A12O75746 678 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 OR2J2O76002 312 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 NEURL1O76050 574 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 HSPA4LO95757 839 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 ATP1B1P05026 303 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 SERPINE1P05121 402 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 SP1P08047 785 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 GRK2P25098 689 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 SLC18A1P54219 525 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 C2orf80Q0P641 193 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 NR6A1Q15406 480 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 CHI3L2Q15782 390 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 MPEG1Q2M385 716 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 HHATQ5VTY9 493 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 SLC25A25Q6KCM7 469 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 NOXRED1Q6NXP6 359 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 IKBIPQ70UQ0 350 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 DDIASQ8IXT1 998 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 KIRREL3Q8IZU9 778 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 OR7G1Q8NGA0 311 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 SLC22A8Q8TCC7 542 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 GRHL3Q8TE85 626 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 FAR1Q8WVX9 515 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 ZBTB9Q96C00 473 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 PKNOX2Q96KN3 472 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 CLMPQ9H6B4 373 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 MYNNQ9NPC7 610 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 HPF1Q9NWY4 346 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 HEY2Q9UBP5 337 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 ENTPD4Q9Y227 616 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 NTNG1Q9Y2I2 539 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 TMED5Q9Y3A6 229 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 POLR3HQ9Y535 204 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-209ENST00000557342 CFAP46Q8IYW2 2715 aa11.59□□□□□ -0.55
SLIRP-209ENST00000557342 TMEM200CA6NKL6 621 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 TCP11X1B4DZS4 312 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 HRKO00198 91 aa11.58□□□□□ -0.56
SLIRP-209ENST00000557342 WWP2O00308 870 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms