RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 NEDD4P46934 1319 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 RB1CC1Q8TDY2 1594 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 ANKRD30BLA7E2S9 258 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 HHLA1C9JL84 531 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 VPS26AO75436 327 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 CSDE1O75534 798 aaKnown RBP3.72□□□□□ -1.81
PRPF39-210ENST00000556718 CEACAM4O75871 244 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 NXPH2O95156 264 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 ANGPTL1O95841 491 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 CALCAP01258 141 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 CD48P09326 243 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 CALCBP10092 127 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 GP9P14770 177 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 MYOGP15173 224 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 CEBPBP17676 345 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 FUT1P19526 365 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 ADSSP30520 456 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 RPL9P32969 192 aaKnown RBP3.72□□□□□ -1.81
PRPF39-210ENST00000556718 MATKP42679 507 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 DHODHQ02127 395 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 SHROOM1Q2M3G4 852 aaPredicted RBP3.72□□□□□ -1.81
PRPF39-210ENST00000556718 HLA-BQ31612 363 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 ANKDD1AQ495B1 522 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 Q6ZRG5 221 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 ADGRD2Q7Z7M1 963 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 SLC22A16Q86VW1 577 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 AMZ2Q86W34 360 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 BCORP1Q8N888 145 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 ZNF540Q8NDQ6 660 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 DENND6BQ8NEG7 585 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 DDHD1Q8NEL9 900 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 OR9Q2Q8NGE9 314 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 OR6F1Q8NGZ6 308 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 GIPC3Q8TF64 312 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 CHPT1Q8WUD6 406 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 DEFB118Q96PH6 123 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 RAB40CQ96S21 281 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 DCTN5Q9BTE1 182 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 TPPP3Q9BW30 176 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 ZNF416Q9BWM5 594 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 PINK1Q9BXM7 581 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 CLEC7AQ9BXN2 247 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 CCSER1Q9C0I3 900 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 FNDC4Q9H6D8 234 aaPredicted RBP3.72□□□□□ -1.81
PRPF39-210ENST00000556718 YY1AP1Q9H869 796 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 NMUR1Q9HB89 426 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 YAE1D1Q9NRH1 226 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 CENPMQ9NSP4 180 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 GTSE1Q9NYZ3 720 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 TMOD2Q9NZR1 351 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 ATXN10Q9UBB4 475 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 LHX3Q9UBR4 397 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 RNF215Q9Y6U7 377 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 NCAPD3P42695 1498 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 RAD54L2Q9Y4B4 1467 aa3.72□□□□□ -1.81
PRPF39-210ENST00000556718 ABCC4O15439 1325 aa3.71□□□□□ -1.81
PRPF39-210ENST00000556718 KIF7Q2M1P5 1343 aa3.71□□□□□ -1.81
PRPF39-210ENST00000556718 A0A1W2PR80 420 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 SHISA7A6NL88 538 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 MEI4A8MW99 385 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 MPHOSPH10O00566 681 aaKnown RBP3.71□□□□□ -1.82
PRPF39-210ENST00000556718 ANGPT2O15123 496 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 BUB1O43683 1085 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 CSO75390 466 aaKnown RBP3.71□□□□□ -1.82
PRPF39-210ENST00000556718 HSPA5P11021 654 aaKnown RBP3.71□□□□□ -1.82
PRPF39-210ENST00000556718 CYP2F1P24903 491 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 PPP2R1AP30153 589 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 PRDX2P32119 198 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 TIMP3P35625 211 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 NPY2RP49146 381 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 ERVK-16P61578 105 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 CYCSP99999 105 aaKnown RBP3.71□□□□□ -1.82
PRPF39-210ENST00000556718 RBBP4Q09028 425 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 RAPSNQ13702 412 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 P2RY14Q15391 338 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 MTHFSDQ2M296 383 aaKnown RBP3.71□□□□□ -1.82
PRPF39-210ENST00000556718 ZNF876PQ49A33 203 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 CES4AQ5XG92 561 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 FAM53AQ6NSI3 398 aaPredicted RBP3.71□□□□□ -1.82
PRPF39-210ENST00000556718 SASS6Q6UVJ0 657 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 Q6ZSR9 355 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 GOLGA7Q7Z5G4 137 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 ZNF573Q86YE8 665 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 APLFQ8IW19 511 aaPredicted RBP3.71□□□□□ -1.82
PRPF39-210ENST00000556718 LINC00518Q8N0U6 118 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 GVQW1Q8N7I0 195 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 GMCL1P1Q8NEA9 526 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 MRPL24Q96A35 216 aaKnown RBP3.71□□□□□ -1.82
PRPF39-210ENST00000556718 GMPPAQ96IJ6 420 aaPredicted RBP3.71□□□□□ -1.82
PRPF39-210ENST00000556718 COG3Q96JB2 828 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 ANKRD27Q96NW4 1050 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 GPA33Q99795 319 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 NDUFAF3Q9BU61 184 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 WRAP53Q9BUR4 548 aaKnown RBP3.71□□□□□ -1.82
PRPF39-210ENST00000556718 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 MED20Q9H944 212 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 ACTR8Q9H981 624 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 B3GAT2Q9NPZ5 323 aa3.71□□□□□ -1.82
PRPF39-210ENST00000556718 CSNK1G3Q9Y6M4 447 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms