RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 STT3AP46977 705 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 CCT3P49368 545 aaKnown RBP8.65□□□□□ -1.02
ACTN1-218ENST00000556343 CLDN6P56747 220 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 NCALDP61601 193 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 PHC1P78364 1004 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 VAC14Q08AM6 782 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 HSPB3Q12988 150 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 PUM1Q14671 1186 aaKnown RBP eCLIP8.65□□□□□ -1.02
ACTN1-218ENST00000556343 NSDHLQ15738 373 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 NKG7Q16617 165 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 RUNDC3AQ59EK9 446 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 VWA2Q5GFL6 755 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 NANOGP8Q6NSW7 305 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 ANGPTL8Q6UXH0 198 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 DLEU7Q6UYE1 221 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 BNC2Q6ZN30 1099 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-218ENST00000556343 RETREG3Q86VR2 466 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 ZC3H7AQ8IWR0 971 aaKnown RBP8.65□□□□□ -1.02
ACTN1-218ENST00000556343 SCUBE1Q8IWY4 988 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 OR4N5Q8IXE1 308 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 C10orf67Q8IYJ2 551 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 CLECL1Q8IZS7 167 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 NLGN4XQ8N0W4 816 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 MMP21Q8N119 569 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 SLC38A9Q8NBW4 561 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 NLGN4YQ8NFZ3 816 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-218ENST00000556343 PSMA8Q8TAA3 256 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 RIT1Q92963 219 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 ANKRD9Q96BM1 317 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-218ENST00000556343 SLC7A6OSQ96CW6 309 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-218ENST00000556343 FAM122AQ96E09 287 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 CNRIP1Q96F85 164 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-218ENST00000556343 SLC45A3Q96JT2 553 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 ART5Q96L15 291 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 ZNF681Q96N22 645 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 ANKRD27Q96NW4 1050 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 CDRT15Q96T59 188 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 SLC35A5Q9BS91 424 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 THTPAQ9BU02 230 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 EFHD1Q9BUP0 239 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 SPATA9Q9BWV2 254 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 GPR87Q9BY21 358 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 RBCK1Q9BYM8 510 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 NRSN2Q9GZP1 204 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 PAIP1Q9H074 479 aaKnown RBP8.65□□□□□ -1.02
ACTN1-218ENST00000556343 CHST8Q9H2A9 424 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 NANOGQ9H9S0 305 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 SERHLQ9NQF3 203 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 LANCL2Q9NS86 450 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 DLL3Q9NYJ7 618 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 PTGFRNQ9P2B2 879 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 CFL2Q9Y281 166 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 CLCA3PQ9Y6N3 262 aa8.65□□□□□ -1.02
ACTN1-218ENST00000556343 ZNF292O60281 2723 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 A0A087WV62 115 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 RNF103-CHMP3A0A140T963 221 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 DCDC2BA2VCK2 349 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 ASPDHA6ND91 283 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 TTC36A6NLP5 189 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 C21orf140B9A014 251 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 C9orf172C9J069 976 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 GSC2O15499 205 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 RAD1O60671 282 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 COQ9O75208 318 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 ALOX12BO75342 701 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 DLGAP3O95886 979 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 AGR2O95994 175 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 GSNP06396 782 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 ZNF28P17035 718 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 TCN2P20062 427 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 EFNA1P20827 205 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 SLC5A2P31639 672 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 CPOXP36551 454 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 FOLR3P41439 243 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 PRIM2P49643 509 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 EEFSECP57772 596 aaKnown RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 OR4D2P58180 307 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 SNRPNP63162 240 aaKnown RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 HBA1P69905 142 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 BTG2P78543 158 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 IGLV3-21P80748 117 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 ID2Q02363 134 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 MAP4K2Q12851 820 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 FADDQ13158 208 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 GNA13Q14344 377 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 ELAVL1Q15717 326 aaKnown RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 MPEG1Q2M385 716 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 ZNF385CQ66K41 422 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 MRPL14Q6P1L8 145 aaKnown RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 ZCCHC12Q6PEW1 402 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 IGF2-ASQ6U949 168 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 COX15Q7KZN9 410 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 ASRGL1Q7L266 308 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 ZNF551Q7Z340 670 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-218ENST00000556343 SZRD1Q7Z422 152 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 TMEM151BQ8IW70 566 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 GALNT12Q8IXK2 581 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 PRSS58Q8IYP2 241 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 FBXW8Q8N3Y1 598 aa8.64□□□□□ -1.03
ACTN1-218ENST00000556343 DTWD1Q8N5C7 304 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms