RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 CFL2Q9Y281 166 aa7.18□□□□□ -1.26
PTCSC3-201ENST00000556013 CCDC168Q8NDH2 2452 aa7.18□□□□□ -1.26
PTCSC3-201ENST00000556013 FBN2P35556 2912 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 POLQO75417 2590 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 F8P00451 2351 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 SPG11Q96JI7 2443 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 C2orf92A0A1B0GVN3 265 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 A0A1W2PR48 441 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 HMX2A2RU54 273 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 HSPB2A8KAH6 182 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 SYT5O00445 386 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 ZNHIT1O43257 154 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 FAM155BO75949 473 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 FAM58BPP0C7Q3 252 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 GLI4P10075 376 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 CCL3P10147 92 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 GFAPP14136 432 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 CNTFP26441 200 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 MAGEA5P43359 124 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 TMED10P49755 219 aaKnown RBP7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 SERPINB9P50453 376 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 MRPS25P82663 173 aaKnown RBP7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 SLMAPQ14BN4 828 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 EBPQ15125 230 aaKnown RBP7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 HSPB2Q16082 182 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 CPSF6Q16630 551 aaKnown RBP eCLIP7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 PFKFB4Q16877 469 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 GGTA1PQ4G0N0 100 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 MROH9Q5TGP6 573 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 TMEM198Q66K66 360 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 C18orf63Q68DL7 685 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 RTL6Q6ICC9 239 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 ZNF585AQ6P3V2 769 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 ADGRD1Q6QNK2 874 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 RNF111Q6ZNA4 994 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 NCCRP1Q6ZVX7 275 aaPredicted RBP7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 NUDT13Q86X67 352 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 OR4N5Q8IXE1 308 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 C9orf40Q8IXQ3 194 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 ZNF441Q8N8Z8 693 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 OR7G1Q8NGA0 311 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 OR10Q1Q8NGQ4 319 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 NEIL3Q8TAT5 605 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 KCTD4Q8WVF5 259 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 ATP6V1E2Q96A05 226 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 PPWD1Q96BP3 646 aaKnown RBP7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 NTNG2Q96CW9 530 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 LRRC46Q96FV0 321 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 MTERF1Q99551 399 aaKnown RBP7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 UCK2Q9BZX2 261 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 WWTR1Q9GZV5 400 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 ACSS3Q9H6R3 686 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 CXorf21Q9HAI6 301 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 PROK2Q9HC23 129 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 PRM3Q9NNZ6 103 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 NPDC1Q9NQX5 325 aaPredicted RBP7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 PNPLA3Q9NST1 481 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 NMRK1Q9NWW6 199 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 ZNF629Q9UEG4 869 aaPredicted RBP7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 FOXD3Q9UJU5 478 aaPredicted RBP7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 PSME2Q9UL46 239 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 PYCARDQ9ULZ3 195 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 EDARQ9UNE0 448 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 FAM215AQ9Y5M1 114 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 CHCHD2Q9Y6H1 151 aaPredicted RBP7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 OTOGQ6ZRI0 2925 aa7.17□□□□□ -1.26
PTCSC3-201ENST00000556013 ATP6AP2A0A1C7CYW4 349 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 C1orf226A1L170 272 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 FAM221AA4D161 298 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 FAM166BA8MTA8 275 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 SAP18O00422 153 aaKnown RBP7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 TMPRSS11DO60235 418 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 OR10H2O60403 315 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 TRIM3O75382 744 aaPredicted RBP7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 ATP6AP2O75787 350 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 EPPINO95925 133 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 ALDOAP04075 364 aaKnown RBP7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 NR2F6P10588 404 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 CD1EP15812 388 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 PIK3R1P27986 724 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 TIMP3P35625 211 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 PIGAP37287 484 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 MAGEA12P43365 314 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 DNASE1L1P49184 302 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 SERPINB8P50452 374 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 CCNG1P51959 295 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 HNRNPH2P55795 449 aaKnown RBP7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 NRG3P56975 720 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 KRTAP10-9P60411 292 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 DCAF7P61962 342 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 TRA2BP62995 288 aaKnown RBP7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 HERVK_113P63132 956 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 ERVK-8P63133 956 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 KCNJ2P63252 427 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 ID2Q02363 134 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 CKAP4Q07065 602 aaKnown RBP7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 C2orf54Q08AI8 447 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 MAP4K2Q12851 820 aa7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 ZNF267Q14586 743 aaPredicted RBP7.16□□□□□ -1.26
PTCSC3-201ENST00000556013 TSNAXIP1Q2TAA8 658 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms