RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.36□□□□□ -0.75
TMEM260-208ENST00000555905 CROTQ9UKG9 612 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 NXT1Q9UKK6 140 aaKnown RBP10.36□□□□□ -0.75
TMEM260-208ENST00000555905 MKL2Q9ULH7 1088 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 PCDHGA7Q9Y5G6 932 aa10.36□□□□□ -0.75
TMEM260-208ENST00000555905 TEX51A0A1B0GUA7 166 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 VSTM2BA6NLU5 285 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 SLITRK5O94991 958 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 HEXBP07686 556 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 CYC1P08574 325 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 SLC35E2P0CK97 266 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 MAOAP21397 527 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 CD82P27701 267 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 PTPN4P29074 926 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 SLC5A2P31639 672 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 SOAT1P35610 550 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 HBA1P69905 142 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 IGLV3-21P80748 117 aaPredicted RBP10.35□□□□□ -0.75
TMEM260-208ENST00000555905 SLC25A3Q00325 362 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 NKG7Q16617 165 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 ZNF750Q32MQ0 723 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 SPDYE7PQ495Y7 208 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 DNAL1Q4LDG9 190 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 C6orf163Q5TEZ5 329 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 LCN10Q6JVE6 187 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 DLEU7Q6UYE1 221 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 DNAJC14Q6Y2X3 702 aaPredicted RBP10.35□□□□□ -0.75
TMEM260-208ENST00000555905 ZNF517Q6ZMY9 492 aaPredicted RBP10.35□□□□□ -0.75
TMEM260-208ENST00000555905 ZNF621Q6ZSS3 439 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 ZNF551Q7Z340 670 aaPredicted RBP10.35□□□□□ -0.75
TMEM260-208ENST00000555905 GOT1L1Q8NHS2 421 aaPredicted RBP10.35□□□□□ -0.75
TMEM260-208ENST00000555905 KCTD12Q96CX2 325 aaKnown RBP10.35□□□□□ -0.75
TMEM260-208ENST00000555905 LRRC58Q96CX6 371 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 RBM18Q96H35 190 aaKnown RBP10.35□□□□□ -0.75
TMEM260-208ENST00000555905 DGAT2Q96PD7 388 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 HOPXQ9BPY8 73 aaPredicted RBP10.35□□□□□ -0.75
TMEM260-208ENST00000555905 PELOQ9BRX2 385 aaKnown RBP10.35□□□□□ -0.75
TMEM260-208ENST00000555905 BTBD10Q9BSF8 475 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 ALOXE3Q9BYJ1 711 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 NRSN2Q9GZP1 204 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 VN1R1Q9GZP7 353 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 PAIP1Q9H074 479 aaKnown RBP10.35□□□□□ -0.75
TMEM260-208ENST00000555905 GLIPR2Q9H4G4 154 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 SLAMF7Q9NQ25 335 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 SNX8Q9Y5X2 465 aa10.35□□□□□ -0.75
TMEM260-208ENST00000555905 C15orf38-AP3S2A0A0A6YYH1 394 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 OR2W5A6NFC9 320 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 STMND1H3BQB6 276 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 DYRK3O43781 588 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 IFNA16P05015 189 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 ATP1B1P05026 303 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 GSNP06396 782 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 ZCCHC18P0CG32 403 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 NT5EP21589 574 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 UQCRC2P22695 453 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 CHI3L1P36222 383 aaPredicted RBP10.34□□□□□ -0.75
TMEM260-208ENST00000555905 CPOXP36551 454 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 CDKN2CP42773 168 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 EMP2P54851 167 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 PSME3P61289 254 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 NCALDP61601 193 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 RHAGQ02094 409 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 CAPRIN1Q14444 709 aaKnown RBP10.34□□□□□ -0.75
TMEM260-208ENST00000555905 PUM1Q14671 1186 aaKnown RBP eCLIP10.34□□□□□ -0.75
TMEM260-208ENST00000555905 NCF4Q15080 339 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 NSDHLQ15738 373 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 SPRED3Q2MJR0 410 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 LRIF1Q5T3J3 769 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 MRPL14Q6P1L8 145 aaKnown RBP10.34□□□□□ -0.75
TMEM260-208ENST00000555905 FAM199XQ6PEV8 388 aaPredicted RBP10.34□□□□□ -0.75
TMEM260-208ENST00000555905 IGF2-ASQ6U949 168 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 FAM198BQ6UWH4 519 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 SHISA6Q6ZSJ9 500 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 ARPINQ7Z6K5 226 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 LAPTM4BQ86VI4 370 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 DEFB107AQ8IZN7 70 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 ST13P4Q8IZP2 240 aaPredicted RBP10.34□□□□□ -0.75
TMEM260-208ENST00000555905 NLGN4XQ8N0W4 816 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 PGAM4Q8N0Y7 254 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 PLPP5Q8NEB5 264 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 NLGN4YQ8NFZ3 816 aaPredicted RBP10.34□□□□□ -0.75
TMEM260-208ENST00000555905 OR9A2Q8NGT5 310 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 FBXO27Q8NI29 283 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 PSMA8Q8TAA3 256 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 SUN3Q8TAQ9 357 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 METTL21AQ8WXB1 218 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 MOAP1Q96BY2 351 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 SLC7A6OSQ96CW6 309 aaPredicted RBP10.34□□□□□ -0.75
TMEM260-208ENST00000555905 CGREF1Q99674 301 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 SH3GL1Q99961 368 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 SLC39A3Q9BRY0 314 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 SPRY4Q9C004 299 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 LRMDAQ9H2I8 198 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 SOX17Q9H6I2 414 aaPredicted RBP10.34□□□□□ -0.75
TMEM260-208ENST00000555905 AKIRIN1Q9H9L7 192 aaPredicted RBP10.34□□□□□ -0.75
TMEM260-208ENST00000555905 SPAG4Q9NPE6 437 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 NECTIN3Q9NQS3 549 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 TAS2R1Q9NYW7 299 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 SLAMF8Q9P0V8 285 aa10.34□□□□□ -0.75
TMEM260-208ENST00000555905 C3orf18Q9UK00 162 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms