RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 NT5EP21589 574 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 GALNSP34059 522 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 SERPINB4P48594 390 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 ST13P50502 369 aaKnown RBP11.25□□□□□ -0.61
SRP54-206ENST00000555317 HLCSP50747 726 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 GPR143P51810 404 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 ERVK-8P63133 956 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 RNF4P78317 190 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 ZNF763Q0D2J5 394 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 HEPACAMQ14CZ8 416 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 NR6A1Q15406 480 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 MAPKAPK3Q16644 382 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 SPRED3Q2MJR0 410 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 SH2D4BQ5SQS7 431 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 SPINK14Q6IE38 97 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 SLC48A1Q6P1K1 146 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 ZCCHC23Q6ZST2 131 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 TRIM46Q7Z4K8 759 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 EXOC3L1Q86VI1 746 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 DDIASQ8IXT1 998 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 SAMD14Q8IZD0 417 aaPredicted RBP11.25□□□□□ -0.61
SRP54-206ENST00000555317 CYP4Z2PQ8N1L4 340 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 MDS2Q8NDY4 140 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 OR8K3Q8NH51 312 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 AGR3Q8TD06 166 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 GRHL3Q8TE85 626 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 TM4SF18Q96CE8 201 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 APIPQ96GX9 242 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 SIGLEC12Q96PQ1 595 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 GAL3ST4Q96RP7 486 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 PAIP2Q9BPZ3 127 aaKnown RBP11.25□□□□□ -0.61
SRP54-206ENST00000555317 ARGLU1Q9NWB6 273 aaPredicted RBP11.25□□□□□ -0.61
SRP54-206ENST00000555317 HPF1Q9NWY4 346 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 MYOTQ9UBF9 498 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 ZNF223Q9UK11 482 aaPredicted RBP11.25□□□□□ -0.61
SRP54-206ENST00000555317 UTS2RQ9UKP6 389 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 ERVK-19Q9WJR5 959 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 ENTPD4Q9Y227 616 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 DLGAP4Q9Y2H0 992 aa11.25□□□□□ -0.61
SRP54-206ENST00000555317 SPTBN1Q01082 2364 aaKnown RBP11.24□□□□□ -0.61
SRP54-206ENST00000555317 HIVEP3Q5T1R4 2406 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 SPTAN1Q13813 2472 aaKnown RBP11.24□□□□□ -0.61
SRP54-206ENST00000555317 WDR91A4D1P6 747 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 WASHC1A8K0Z3 465 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 HAX1O00165 279 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 WWP2O00308 870 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 BIRC5O15392 142 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 SEC22BO75396 215 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 HSPA4LO95757 839 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 CHRNGP07510 517 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 DRD2P14416 443 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 GNLYP22749 145 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 TRHRP34981 398 aaPredicted RBP11.24□□□□□ -0.61
SRP54-206ENST00000555317 ARL13AQ5H913 290 aaPredicted RBP11.24□□□□□ -0.61
SRP54-206ENST00000555317 BEND6Q5SZJ8 279 aaPredicted RBP11.24□□□□□ -0.61
SRP54-206ENST00000555317 HHATQ5VTY9 493 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 HLA-DQA1Q5Y7H0 255 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 KANK2Q63ZY3 851 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 SLC25A25Q6KCM7 469 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 GALNT18Q6P9A2 607 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 GPALPP1Q8IXQ4 340 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 CLYBLQ8N0X4 340 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 ARMC10Q8N2F6 343 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 LRRC25Q8N386 305 aaPredicted RBP11.24□□□□□ -0.61
SRP54-206ENST00000555317 ZNF321PQ8N8H1 164 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 DNAJB8Q8NHS0 232 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 FAM76AQ8TAV0 307 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 SLC22A8Q8TCC7 542 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 ZNF721Q8TF20 911 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 C16orf78Q8WTQ4 265 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 FAR1Q8WVX9 515 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 METTL2AQ96IZ6 378 aaKnown RBP11.24□□□□□ -0.61
SRP54-206ENST00000555317 PKNOX2Q96KN3 472 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 BRINP2Q9C0B6 783 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 TNFRSF12AQ9NP84 129 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 TIMMDC1Q9NPL8 285 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 MIEF1Q9NQG6 463 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 C1orf109Q9NX04 203 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 TRAF6Q9Y4K3 522 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 POLR3HQ9Y535 204 aaPredicted RBP11.24□□□□□ -0.61
SRP54-206ENST00000555317 PCDHGB6Q9Y5F9 930 aa11.24□□□□□ -0.61
SRP54-206ENST00000555317 USP9XQ93008 2570 aaPredicted RBP11.24□□□□□ -0.61
SRP54-206ENST00000555317 POLEQ07864 2286 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 PTPN13Q12923 2485 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 ANKUB1A6NFN9 424 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 OR6C76A6NM76 312 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 TCP11X1B4DZS4 312 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 PRKNO60260 465 aaPredicted RBP11.23□□□□□ -0.61
SRP54-206ENST00000555317 SERPINE1P05121 402 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 SP1P08047 785 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 LINC00032P0C843 101 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 FEN1P39748 380 aaKnown RBP11.23□□□□□ -0.61
SRP54-206ENST00000555317 ETV4P43268 484 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 UQCRFS1P47985 274 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 HK2P52789 917 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 RAE1P78406 368 aaKnown RBP11.23□□□□□ -0.61
SRP54-206ENST00000555317 CHI3L2Q15782 390 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 OPN5Q6U736 354 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 DGAT2L6Q6ZPD8 337 aa11.23□□□□□ -0.61
SRP54-206ENST00000555317 GALNTL5Q7Z4T8 443 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms