RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 PKDCCQ504Y2 493 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 TICAM1Q8IUC6 712 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 IQCF1Q8N6M8 205 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 CSNK2A3Q8NEV1 391 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 SORCS1Q8WY21 1168 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 LMF1Q96S06 567 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 SYNPO2LQ9H987 977 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 H7BY64 318 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 AOC2O75106 756 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 GKN3PP0CG01 181 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 RCAN2Q14206 197 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ALG3Q92685 438 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 DDIT4LQ96D03 193 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 PRAP1Q96NZ9 151 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ARNT2Q9HBZ2 717 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 TMEM45AQ9NWC5 275 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 STXBP5LQ9Y2K9 1186 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF705GA8MUZ8 300 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 CILPO75339 1184 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 SOX30O94993 753 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 KNG1P01042 644 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 MAP2K4P45985 399 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ERVK-8P63133 956 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 PPP1R8Q12972 351 aaKnown RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 QPCTQ16769 361 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 SLC36A3Q495N2 470 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 HSD17B12Q53GQ0 312 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ABHD17BQ5VST6 288 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 OR2T5Q6IEZ7 315 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 DCP2Q8IU60 420 aaKnown RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 OR2T29Q8NH02 315 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 OR51A7Q8NH64 312 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 HAS2Q92819 552 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 TSACCQ96A04 125 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 ZNF75AQ96N20 296 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 PCDHAC1Q9H158 963 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 TSPAN10Q9H1Z9 355 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 SAV1Q9H4B6 383 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-216ENST00000555002 POLE4Q9NR33 117 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 KLHL9Q9P2J3 617 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 FBXW11Q9UKB1 542 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 SARDHQ9UL12 918 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 RARRES3Q9UL19 164 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 YIPF1Q9Y548 306 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 PCDHGB6Q9Y5F9 930 aa6.61□□□□□ -1.35
SYNE2-216ENST00000555002 LILRB3O75022 631 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 GALTP07902 379 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 RBPJQ06330 500 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 SLC14A2Q15849 920 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 TIGD5Q53EQ6 642 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 REEP3Q6NUK4 255 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 MON1BQ7L1V2 547 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 CILP2Q8IUL8 1156 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 TSPEARQ8WU66 669 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 IRF7Q92985 503 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 TAAR8Q969N4 342 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 GPATCH2Q9NW75 528 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 UBQLN2Q9UHD9 624 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 RNF11Q9Y3C5 154 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 INSL6Q9Y581 213 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 RHCEP18577 417 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ASPAP45381 313 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ZC3HC1Q86WB0 502 aaKnown RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 SLC15A3Q8IY34 581 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 SAMD11Q96NU1 681 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 SRA1Q9HD15 236 aaKnown RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 FAM86C1Q9NVL1 165 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 DOCK10Q96BY6 2186 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 M0R233 179 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 SLC22A1O15245 554 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 FLRT2O43155 660 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 RHBDF1Q96CC6 855 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 LRIG1Q96JA1 1093 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ZBTB20Q9HC78 741 aaPredicted RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 DLGAP4Q9Y2H0 992 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 VSTM2BA6NLU5 285 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 VEGFDO43915 354 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 LCMT2O60294 686 aaKnown RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 DUSP11O75319 330 aaKnown RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 HLA-DPB1P04440 258 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 OR8U9P0C7N5 309 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 CD34P28906 385 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 CDKN2CP42773 168 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 CLCN2P51788 898 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 NFE2L1Q14494 772 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 CST9LP1Q5W188 147 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 TMEM71Q6P5X7 295 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 GOLGA7Q7Z5G4 137 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 FAM160A2Q8N612 972 aaPredicted RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 PPP1R35Q8TAP8 253 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 FBXL18Q96ME1 805 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 OR1E2P47887 323 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 HK3P52790 923 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 TAS2R43P59537 309 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ADARB1P78563 741 aaKnown RBP6.6□□□□□ -1.35
SYNE2-216ENST00000555002 RHDQ02161 417 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 DAG1Q14118 895 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 ARHGAP19Q14CB8 494 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 TUBA3EQ6PEY2 450 aa6.6□□□□□ -1.35
SYNE2-216ENST00000555002 C3P1Q6ZMU1 363 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms