RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 TRIM46Q7Z4K8 759 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 PDSS2Q86YH6 399 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 FAM26EQ8N5C1 309 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 SIRT6Q8N6T7 355 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 BRIX1Q8TDN6 353 aaKnown RBP11.68□□□□□ -0.54
SHMT2-214ENST00000554604 SNRNP40Q96DI7 357 aaKnown RBP11.68□□□□□ -0.54
SHMT2-214ENST00000554604 ASB9Q96DX5 294 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 PEX11GQ96HA9 241 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 LMF1Q96S06 567 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 GPATCH1Q9BRR8 931 aaKnown RBP11.68□□□□□ -0.54
SHMT2-214ENST00000554604 ZNF700Q9H0M5 742 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 GID8Q9NWU2 228 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 ASIC5Q9NY37 505 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 PTGFRNQ9P2B2 879 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 TMEM181Q9P2C4 612 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 POLEQ07864 2286 aa11.68□□□□□ -0.54
SHMT2-214ENST00000554604 UTP20O75691 2785 aaKnown RBP11.68□□□□□ -0.54
SHMT2-214ENST00000554604 A0A1W2PP18 115 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 SERTM1A2A2V5 107 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 FAM234BA2RU67 622 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 MANBAO00462 879 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 ACOT8O14734 319 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 GALR3O60755 368 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-214ENST00000554604 SLC22A3O75751 556 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 CDC123O75794 336 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-214ENST00000554604 SEC24DO94855 1032 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-214ENST00000554604 KRT6AP02538 564 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 KRT6BP04259 564 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 ZNF888P0CJ79 500 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-214ENST00000554604 PCSK2P16519 638 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 EPORP19235 508 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 IL10P22301 178 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 HNF4AP41235 474 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 GDF5P43026 501 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 ZFP36L2P47974 494 aaKnown RBP11.67□□□□□ -0.54
SHMT2-214ENST00000554604 KRT6CP48668 564 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 SESN3P58005 492 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 ARG2P78540 354 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 ZNF33BQ06732 778 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 ABRAXAS2Q15018 415 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 PCOLCEQ15113 449 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 TLR1Q15399 786 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 NR6A1Q15406 480 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 TAF11Q15544 211 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 SCIMPQ6UWF3 145 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 IGFL2Q6UWQ7 119 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 LANCL3Q6ZV70 420 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 CPEB2Q7Z5Q1 589 aaKnown RBP11.67□□□□□ -0.54
SHMT2-214ENST00000554604 DHDDSQ86SQ9 333 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 RETREG3Q86VR2 466 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 SHISA5Q8N114 240 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 SNX31Q8N9S9 440 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 L3MBTL4Q8NA19 623 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 FNDC5Q8NAU1 212 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 NT5CQ8TCD5 201 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 SPDL1Q96EA4 605 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 OR1F2PQ96R84 312 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 RBCK1Q9BYM8 510 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 SPNS1Q9H2V7 528 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 ASF1BQ9NVP2 202 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 NMRK1Q9NWW6 199 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 ADA2Q9NZK5 511 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 ABCD2Q9UBJ2 740 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 CD300AQ9UGN4 299 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 CSAG2Q9Y5P2 127 aa11.67□□□□□ -0.54
SHMT2-214ENST00000554604 IGHV3-20A0A0C4DH32 117 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 OR2W5A6NFC9 320 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 NPIPB8E9PQR5 432 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 H3BNX3 289 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 CLGNO14967 610 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 UGDHO60701 494 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 ULK1O75385 1050 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 EEDO75530 441 aaKnown RBP11.66□□□□□ -0.54
SHMT2-214ENST00000554604 AGFG2O95081 481 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 NPPAP01160 153 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 C1GALT1C1LP0DN25 315 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 ACADSP16219 412 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 JAK1P23458 1154 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 PRPH2P23942 346 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 POLR2JP52435 117 aaKnown RBP11.66□□□□□ -0.54
SHMT2-214ENST00000554604 RAB8AP61006 207 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 MS4A2Q01362 244 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 TRIM25Q14258 630 aaKnown RBP11.66□□□□□ -0.54
SHMT2-214ENST00000554604 ZNF169Q14929 603 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-214ENST00000554604 NSDHLQ15738 373 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 AP5B1Q2VPB7 878 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 BTBD16Q32M84 506 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 VPS26BQ4G0F5 336 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 FHL5Q5TD97 284 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 KRT78Q8N1N4 520 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 AMER2Q8N7J2 671 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 ANKRD53Q8N9V6 530 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 TTLQ8NG68 377 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 OR5T3Q8NGG3 340 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 UTP15Q8TED0 518 aaKnown RBP11.66□□□□□ -0.54
SHMT2-214ENST00000554604 PYDC1Q8WXC3 89 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 DNAJC9Q8WXX5 260 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 TBC1D20Q96BZ9 403 aa11.66□□□□□ -0.54
SHMT2-214ENST00000554604 RSRC1Q96IZ7 334 aaKnown RBP11.66□□□□□ -0.54
SHMT2-214ENST00000554604 ACTR8Q9H981 624 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms