RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 LRRC14Q15048 493 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 SSX2Q16385 188 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 UGT8Q16880 541 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 KNOP1Q1ED39 458 aaKnown RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 ACCSLQ4AC99 568 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ACTBL2Q562R1 376 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 SPANXN2Q5MJ10 180 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 C1orf220Q5T0J3 134 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 SPATA46Q5T0L3 261 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 MBNL2Q5VZF2 373 aaKnown RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 NCR3LG1Q68D85 454 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ZNF776Q68DI1 518 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 HSDL2Q6YN16 418 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 CLEC20AQ6ZU45 233 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 TRPM8Q7Z2W7 1104 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ADIPOR2Q86V24 386 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ZDHHC13Q8IUH4 622 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 PHYKPLQ8IUZ5 450 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 CCDC28AQ8IWP9 274 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 IQCKQ8N0W5 287 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 CLYBLQ8N0X4 340 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ZNF843Q8N446 348 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 KIF2BQ8N4N8 673 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 COMMD1Q8N668 190 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 METTL25Q8N6Q8 603 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ZNF610Q8N9Z0 462 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 CYB561A3Q8NBI2 242 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 OR2L3Q8NG85 312 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 OR56B1Q8NGI3 324 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 SUN3Q8TAQ9 357 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 PLEKHO2Q8TD55 490 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 MRGPRFQ96AM1 343 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 TMEM186Q96B77 213 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 C10orf90Q96M02 699 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 PACRGQ96M98 296 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 ZNF583Q96ND8 569 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 SIGLEC11Q96RL6 698 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 TRIB1Q96RU8 372 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 KCTD15Q96SI1 283 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 DIRC2Q96SL1 478 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 DPH2Q9BQC3 489 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 CDADC1Q9BWV3 514 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 FGFBP2Q9BYJ0 223 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 GAREM1Q9H706 876 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 GLOD4Q9HC38 313 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 YAE1D1Q9NRH1 226 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 CMTM6Q9NX76 183 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 CLEC2DQ9UHP7 191 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 TBC1D24Q9ULP9 559 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 RCE1Q9Y256 329 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 RAXQ9Y2V3 346 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ZNF281Q9Y2X9 895 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 MFHAS1Q9Y4C4 1052 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ZNF462Q96JM2 2506 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 DOCK4Q8N1I0 1966 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ATXN2Q99700 1313 aaKnown RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 A0A1W2PPV4 95 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ANTXRLA6NF34 631 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 TRABD2BA6NFA1 517 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 C2orf74A8MZ97 194 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 TGFBR3LH3BV60 316 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 TOR1AO14656 332 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 POLR1CO15160 346 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 KLRC4O43908 158 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 BRI3O95415 125 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 BCL10O95999 233 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 MT-ND2P03891 347 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ATXN1LP0C7T5 689 aaKnown RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 CD19P15391 556 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ZNF18P17022 549 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 GABRB1P18505 474 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 UGT1A6P19224 532 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 RAB4AP20338 218 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 PRKCHP24723 683 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 HOXD9P28356 352 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 CDH5P33151 784 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 STAT6P42226 847 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 PGFP49763 221 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ITGA1P56199 1179 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 LGALS4P56470 323 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 NKX6-1P78426 367 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 B4GALNT1Q00973 533 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 IRF9Q00978 393 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 ALKBH1Q13686 389 aaKnown RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 DGCR6Q14129 220 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 KIF19Q2TAC6 998 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 PDLIM3Q53GG5 364 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 HP1BP3Q5SSJ5 553 aaPredicted RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 SLC35F1Q5T1Q4 408 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 PXDC1Q5TGL8 231 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 GPR157Q5UAW9 335 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 CARD17Q5XLA6 110 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 TMEM215Q68D42 235 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 NCEH1Q6PIU2 408 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 RBPMS2Q6ZRY4 209 aaKnown RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 CLEC14AQ86T13 490 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 DCP2Q8IU60 420 aaKnown RBP2.57□□□□□ -2
PRPF39-206ENST00000554429 BOD1L2Q8IYS8 172 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 C19orf18Q8NEA5 215 aa2.57□□□□□ -2
PRPF39-206ENST00000554429 TMEM185AQ8NFB2 350 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms