RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 PGRP06401 933 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 NCF2P19878 526 aaPredicted RBP12.72□□□□□ -0.37
PSMC6-205ENST00000553899 POLR2JP52435 117 aaKnown RBP12.72□□□□□ -0.37
PSMC6-205ENST00000553899 TMPRSS3P57727 454 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 OR4D2P58180 307 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 UFM1P61960 85 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 IL10RAQ13651 578 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 PLAG1Q6DJT9 500 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 INO80CQ6PI98 192 aaPredicted RBP12.72□□□□□ -0.37
PSMC6-205ENST00000553899 CCDC81Q6ZN84 652 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 SHISA6Q6ZSJ9 500 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 SHISA5Q8N114 240 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 KRTCAP2Q8N6L1 136 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 OR8K3Q8NH51 312 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 GOT1L1Q8NHS2 421 aaPredicted RBP12.72□□□□□ -0.37
PSMC6-205ENST00000553899 CLHC1Q8NHS4 586 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 M1APQ8TC57 530 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 PTPMT1Q8WUK0 201 aaPredicted RBP12.72□□□□□ -0.37
PSMC6-205ENST00000553899 ZCCHC14Q8WYQ9 949 aaKnown RBP12.72□□□□□ -0.37
PSMC6-205ENST00000553899 RIT1Q92963 219 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 THOC1Q96FV9 657 aaKnown RBP12.72□□□□□ -0.37
PSMC6-205ENST00000553899 AMDHD1Q96NU7 426 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 BBS4Q96RK4 519 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 WDR77Q9BQA1 342 aaPredicted RBP12.72□□□□□ -0.37
PSMC6-205ENST00000553899 DUSP26Q9BV47 211 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 RBCK1Q9BYM8 510 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 SEMA4CQ9C0C4 833 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 CXorf21Q9HAI6 301 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.72□□□□□ -0.37
PSMC6-205ENST00000553899 P4HTMQ9NXG6 502 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 PTGFRNQ9P2B2 879 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 ZNF639Q9UID6 485 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 POLHQ9Y253 713 aa12.72□□□□□ -0.37
PSMC6-205ENST00000553899 ACACBO00763 2458 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 CELSR3Q9NYQ7 3312 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 DSPP15924 2871 aaKnown RBP12.71□□□□□ -0.37
PSMC6-205ENST00000553899 SAGE2PA6NJ88 616 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 TAF4O00268 1085 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 AKAP10O43572 662 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 OR10H2O60403 315 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 SCN2BO60939 215 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 PRKRAO75569 313 aaKnown RBP12.71□□□□□ -0.37
PSMC6-205ENST00000553899 LRATO95237 230 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 IGKV3-11P04433 115 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 LAMP1P11279 417 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 COX6A1P12074 109 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 S100A3P33764 101 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 MAGEA8P43361 318 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 ZFP36L2P47974 494 aaKnown RBP12.71□□□□□ -0.37
PSMC6-205ENST00000553899 GPR143P51810 404 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 RPS18P62269 152 aaKnown RBP12.71□□□□□ -0.37
PSMC6-205ENST00000553899 PSPHP78330 225 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 FUT7Q11130 342 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 CDC20Q12834 499 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 PCOLCEQ15113 449 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 MAPRE2Q15555 327 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 PRICKLE4Q2TBC4 344 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 FAM174BQ3ZCQ3 159 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 SFT2D3Q587I9 215 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 COQ5Q5HYK3 327 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 FAM91A1Q658Y4 838 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 JMJD6Q6NYC1 403 aaPredicted RBP12.71□□□□□ -0.37
PSMC6-205ENST00000553899 VASH2Q86V25 355 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 FUNDC1Q8IVP5 155 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 APLFQ8IW19 511 aaPredicted RBP12.71□□□□□ -0.37
PSMC6-205ENST00000553899 TMEM151BQ8IW70 566 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 PRSS58Q8IYP2 241 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 MMP21Q8N119 569 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 ARMC10Q8N2F6 343 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 NFAM1Q8NET5 270 aaPredicted RBP12.71□□□□□ -0.37
PSMC6-205ENST00000553899 B3GNT7Q8NFL0 401 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 OR7G1Q8NGA0 311 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 OR7A2PQ8NGA2 310 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 CDC26Q8NHZ8 85 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 SUN3Q8TAQ9 357 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 OR5P2Q8WZ92 322 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 TSLPQ969D9 159 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 EXOSC8Q96B26 276 aaKnown RBP12.71□□□□□ -0.37
PSMC6-205ENST00000553899 TEX37Q96LM6 180 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 CCDC115Q96NT0 180 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 FAM107BQ9H098 131 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 MYLK2Q9H1R3 596 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 MMP25Q9NPA2 562 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 SLC52A3Q9NQ40 469 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 BTNL2Q9UIR0 455 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 RAXQ9Y2V3 346 aa12.71□□□□□ -0.37
PSMC6-205ENST00000553899 LAMA5O15230 3695 aa12.71□□□□□ -0.38
PSMC6-205ENST00000553899 NSG1A0A0A6YYJ2 146 aa12.7□□□□□ -0.38
PSMC6-205ENST00000553899 A0A1W2PP18 115 aa12.7□□□□□ -0.38
PSMC6-205ENST00000553899 A0A1W2PRB8 838 aa12.7□□□□□ -0.38
PSMC6-205ENST00000553899 OR2W5A6NFC9 320 aa12.7□□□□□ -0.38
PSMC6-205ENST00000553899 OR6C76A6NM76 312 aa12.7□□□□□ -0.38
PSMC6-205ENST00000553899 WASHC1A8K0Z3 465 aa12.7□□□□□ -0.38
PSMC6-205ENST00000553899 NDUFAB1O14561 156 aa12.7□□□□□ -0.38
PSMC6-205ENST00000553899 CFLARO15519 480 aa12.7□□□□□ -0.38
PSMC6-205ENST00000553899 NPPAP01160 153 aa12.7□□□□□ -0.38
PSMC6-205ENST00000553899 IFNA16P05015 189 aa12.7□□□□□ -0.38
PSMC6-205ENST00000553899 IL12AP29459 219 aa12.7□□□□□ -0.38
PSMC6-205ENST00000553899 OTX2P32243 289 aa12.7□□□□□ -0.38
PSMC6-205ENST00000553899 MANFP55145 182 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms