RNA–Protein interactions for RNA: ENST00000553710.1

KTN1-211, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-211ENST00000553710 RFTN2Q52LD8 501 aaPredicted RBP0.7□□□□□ -2.3
KTN1-211ENST00000553710 C6orf136Q5SQH8 315 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 TCEAL6Q6IPX3 200 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 TATDN1Q6P1N9 297 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 FUT10Q6P4F1 479 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 PLPPR4Q7Z2D5 763 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 KBTBD6Q86V97 674 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 ARL14Q8N4G2 192 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 LIPHQ8WWY8 451 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 RBM41Q96IZ5 413 aaKnown RBP0.7□□□□□ -2.3
KTN1-211ENST00000553710 SEC62Q99442 399 aaKnown RBP0.7□□□□□ -2.3
KTN1-211ENST00000553710 GLT8D2Q9H1C3 349 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 SEPT11Q9NVA2 429 aaKnown RBP0.7□□□□□ -2.3
KTN1-211ENST00000553710 SPG21Q9NZD8 308 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 RCOR3Q9P2K3 495 aaPredicted RBP0.7□□□□□ -2.3
KTN1-211ENST00000553710 SUCLA2Q9P2R7 463 aaPredicted RBP0.7□□□□□ -2.3
KTN1-211ENST00000553710 PRODH2Q9UF12 536 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 DDX25Q9UHL0 483 aaKnown RBP0.7□□□□□ -2.3
KTN1-211ENST00000553710 HECTD4Q9Y4D8 3996 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 DNAH1Q9P2D7 4330 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 WDR97A6NE52 1622 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 EEA1Q15075 1411 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 ARHGAP21Q5T5U3 1957 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 SACSQ9NZJ4 4579 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 ADGRB1O14514 1584 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 ADGRB2O60241 1585 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 PARD3Q8TEW0 1356 aa0.7□□□□□ -2.3
KTN1-211ENST00000553710 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.7□□□□□ -2.3
KTN1-211ENST00000553710 ICE1Q9Y2F5 2266 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 PKD1L3Q7Z443 1732 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 DYNC2H1Q8NCM8 4307 aaKnown RBP0.69□□□□□ -2.3
KTN1-211ENST00000553710 LRRC9Q6ZRR7 1453 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 MYO3AQ8NEV4 1616 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 A8MX80 341 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 TMCO5BA8MYB1 307 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 PTGES3LE9PB15 166 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 IFRD1O00458 451 aaPredicted RBP0.69□□□□□ -2.3
KTN1-211ENST00000553710 PTGESO14684 152 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 GPX5O75715 221 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 RECQL5O94762 991 aaPredicted RBP0.69□□□□□ -2.3
KTN1-211ENST00000553710 GJB5O95377 273 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 PENKP01210 267 aaPredicted RBP0.69□□□□□ -2.3
KTN1-211ENST00000553710 HSD17B1P14061 328 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 MYL6BP14649 208 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 PPP2R1BP30154 601 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 DIO3P55073 304 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 RASA2Q15283 850 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 KYAT1Q16773 422 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 NAA16Q6N069 864 aaPredicted RBP0.69□□□□□ -2.3
KTN1-211ENST00000553710 C15orf52Q6ZUT6 534 aaKnown RBP0.69□□□□□ -2.3
KTN1-211ENST00000553710 SYVN1Q86TM6 617 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 PRUNE1Q86TP1 453 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 CPXCR1Q8N123 301 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 TTC39CQ8N584 583 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 RNF182Q8N6D2 247 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 Q8N9G6 341 aaPredicted RBP0.69□□□□□ -2.3
KTN1-211ENST00000553710 CLEC1AQ8NC01 280 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 MARCH1Q8TCQ1 289 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 CPNE1Q99829 537 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 JPH2Q9BR39 696 aaPredicted RBP0.69□□□□□ -2.3
KTN1-211ENST00000553710 NT5DC2Q9H857 520 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 ZNF702PQ9H963 129 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 DNAJC4Q9NNZ3 241 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 UBE2TQ9NPD8 197 aaPredicted RBP0.69□□□□□ -2.3
KTN1-211ENST00000553710 EIF2B3Q9NR50 452 aaKnown RBP0.69□□□□□ -2.3
KTN1-211ENST00000553710 LUZP4Q9P127 313 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 APOBEC3BQ9UH17 382 aaKnown RBP0.69□□□□□ -2.3
KTN1-211ENST00000553710 ZNF223Q9UK11 482 aaPredicted RBP0.69□□□□□ -2.3
KTN1-211ENST00000553710 ADAMTSL1Q8N6G6 1762 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 AHCTF1Q8WYP5 2266 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 PRG4Q92954 1404 aaPredicted RBP0.69□□□□□ -2.3
KTN1-211ENST00000553710 MAST1Q9Y2H9 1570 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 KMT2DO14686 5537 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 TRRAPQ9Y4A5 3859 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 TRPM3Q9HCF6 1732 aaPredicted RBP0.69□□□□□ -2.3
KTN1-211ENST00000553710 SLIT1O75093 1534 aa0.69□□□□□ -2.3
KTN1-211ENST00000553710 CSMD3Q7Z407 3707 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 MUC12Q9UKN1 5478 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 TICRRQ7Z2Z1 1910 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 CMYA5Q8N3K9 4069 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 IGLV8-61A0A075B6I0 122 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 NEDD8-MDP1E9PL57 170 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 TRIM77I1YAP6 450 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 ICOSLGO75144 302 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 UFL1O94874 794 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 UGT1A6P19224 532 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 OAS2P29728 719 aaKnown RBP0.68□□□□□ -2.3
KTN1-211ENST00000553710 HSD17B3P37058 310 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 PSMB10P40306 273 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 NT5C2P49902 561 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 COL7A1Q02388 2944 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 PTGES3Q15185 160 aaKnown RBP0.68□□□□□ -2.3
KTN1-211ENST00000553710 MICAQ29983 383 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 QRICH1Q2TAL8 776 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 NHSL2Q5HYW2 709 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 PAGE2BQ5JRK9 111 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 SLC22A10Q63ZE4 541 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 HAUS3Q68CZ6 603 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 CYB5R2Q6BCY4 276 aa0.68□□□□□ -2.3
KTN1-211ENST00000553710 COX8CQ7Z4L0 72 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms