RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 MAN2C1Q9NTJ4 1040 aa6.57□□□□□ -1.36
LINC-ROR-201ENST00000553704 KLHL3Q9UH77 587 aa6.57□□□□□ -1.36
LINC-ROR-201ENST00000553704 A4GNTQ9UNA3 340 aa6.57□□□□□ -1.36
LINC-ROR-201ENST00000553704 ZNF232Q9UNY5 417 aa6.57□□□□□ -1.36
LINC-ROR-201ENST00000553704 CARD8Q9Y2G2 431 aa6.57□□□□□ -1.36
LINC-ROR-201ENST00000553704 CHD9Q3L8U1 2897 aa6.57□□□□□ -1.36
LINC-ROR-201ENST00000553704 LINC00854A0A1B0GVQ3 168 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 A0A1W2PS29 197 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 C4orf51C9J302 202 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 MPZL2O60487 215 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 H1F0P07305 194 aaKnown RBP6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 OR12D1P0DN82 309 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 ALPPL2P10696 532 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 CEBPBP17676 345 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 TNNI3P19429 210 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 PPM1AP35813 382 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 CD79BP40259 229 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 NNMTP40261 264 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 KCNJ5P48544 419 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 EPHA5P54756 1037 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 PCBP4P57723 403 aaKnown RBP6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 COPZ1P61923 177 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 RHAGQ02094 409 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 FUT5Q11128 374 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 ILKQ13418 452 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 SPHARQ15513 63 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 TAB1Q15750 504 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 TIMM50Q3ZCQ8 353 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 SPDYE7PQ495Y7 208 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 DCST1Q5T197 706 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 MFSD4BQ5TF39 518 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 AGAP6Q5VW22 663 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 LCTLQ6UWM7 567 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 UNC5DQ6UXZ4 953 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 SPRED2Q7Z698 418 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 UBE3DQ7Z6J8 389 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 C11orf74Q86VG3 221 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 GPR65Q8IYL9 337 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 OR8H2Q8N162 312 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 SYT14Q8NB59 555 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 OR2L2Q8NH16 312 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 KLHL6Q8WZ60 621 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 OR5P2Q8WZ92 322 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 RSPRY1Q96DX4 576 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 ZNF486Q96H40 463 aaPredicted RBP6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 TMEM80Q96HE8 168 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 CEP19Q96LK0 163 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 AGAP4Q96P64 663 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 TREX2Q9BQ50 279 aaPredicted RBP6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 PLA2G12AQ9BZM1 189 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 POLR2J3Q9H1A7 115 aaKnown RBP6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 TP63Q9H3D4 680 aaPredicted RBP6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 TPK1Q9H3S4 243 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 RERGLQ9H628 205 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 KCNK12Q9HB15 430 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 NDUFB11Q9NX14 153 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 TVP23BQ9NYZ1 205 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 MARK1Q9P0L2 795 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 MKLN1Q9UL63 735 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 TMCC3Q9ULS5 477 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 REV3LO60673 3130 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 A0A075B6Q4 140 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 PDZK1P1A8MUH7 402 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 ZNF670-ZNF695F2Z2N8 137 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 H7BY64 318 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 FAAHO00519 579 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 SLC28A2O43868 658 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 SLITRK5O94991 958 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 SNX4O95219 450 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 HOXB3P14651 431 aaPredicted RBP6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 MMP11P24347 488 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 ETV5P41161 510 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 PCYT1AP49585 367 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 ETV1P50549 477 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 OR2B6P58173 313 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 PSPHP78330 225 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 TARDBPQ13148 414 aaKnown RBP eCLIP6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 DHCR24Q15392 516 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 ATAD3CQ5T2N8 411 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 RSBN1Q5VWQ0 802 aaPredicted RBP6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 PODNL1Q6PEZ8 512 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 PDZD3Q86UT5 571 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 CACUL1Q86Y37 369 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 KIF18BQ86Y91 864 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 PHC2Q8IXK0 858 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 FAM20CQ8IXL6 584 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 NANOGP1Q8N7R0 232 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 OR52I1Q8NGK6 324 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 OR6F1Q8NGZ6 308 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 CHAC2Q8WUX2 184 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 SMPDL3AQ92484 453 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 PIK3R3Q92569 461 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 TMEM203Q969S6 136 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 EFHD2Q96C19 240 aaPredicted RBP6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 ZFYVE19Q96K21 471 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 ZNF354BQ96LW1 612 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 PRAP1Q96NZ9 151 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 MACROD1Q9BQ69 325 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 MENTQ9BUN1 341 aa6.56□□□□□ -1.36
LINC-ROR-201ENST00000553704 PRR14Q9BWN1 585 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms