RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 MARCKSP29966 332 aaPredicted RBP3.57□□□□□ -1.84
FCF1-204ENST00000553673 CCT6AP40227 531 aaKnown RBP3.57□□□□□ -1.84
FCF1-204ENST00000553673 OPRL1P41146 370 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 PRKCIP41743 596 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 XGP55808 180 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 SRSF9Q13242 221 aaKnown RBP eCLIP3.57□□□□□ -1.84
FCF1-204ENST00000553673 PDIA5Q14554 519 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 TMEM132DQ14C87 1099 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 TAZQ16635 292 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 FAM166AQ6J272 317 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 ZNF613Q6PF04 617 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 DCLRE1AQ6PJP8 1040 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 ZNF497Q6ZNH5 498 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 STXBP4Q6ZWJ1 553 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 CPEB2Q7Z5Q1 589 aaKnown RBP3.57□□□□□ -1.84
FCF1-204ENST00000553673 GPR141Q7Z602 305 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 LRRTM1Q86UE6 522 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 CATSPER3Q86XQ3 398 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 LRTM2Q8N967 370 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 NUP37Q8NFH4 326 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 ZNF519Q8TB69 540 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 SEPT8Q92599 483 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 MOCOSQ96EN8 888 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 CCDC43Q96MW1 224 aaKnown RBP3.57□□□□□ -1.84
FCF1-204ENST00000553673 ZNF396Q96N95 335 aaPredicted RBP3.57□□□□□ -1.84
FCF1-204ENST00000553673 ZNF599Q96NL3 588 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 AGAP3Q96P47 875 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 ATAD5Q96QE3 1844 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 ZNF300Q96RE9 604 aaPredicted RBP3.57□□□□□ -1.84
FCF1-204ENST00000553673 JPH2Q9BR39 696 aaPredicted RBP3.57□□□□□ -1.84
FCF1-204ENST00000553673 SYT11Q9BT88 431 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 THUMPD3Q9BV44 507 aaKnown RBP3.57□□□□□ -1.84
FCF1-204ENST00000553673 MTIF3Q9H2K0 278 aaKnown RBP3.57□□□□□ -1.84
FCF1-204ENST00000553673 EGLN3Q9H6Z9 239 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 MTHFD2LQ9H903 347 aaPredicted RBP3.57□□□□□ -1.84
FCF1-204ENST00000553673 LMAN1LQ9HAT1 526 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 EXOC1Q9NV70 894 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 FBXL4Q9UKA2 621 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 RUVBL2Q9Y230 463 aaKnown RBP3.57□□□□□ -1.84
FCF1-204ENST00000553673 GINS2Q9Y248 185 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 CSNK1G3Q9Y6M4 447 aa3.57□□□□□ -1.84
FCF1-204ENST00000553673 TRAV18A0A075B6X5 111 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 IGKV6-21A0A0C4DH24 114 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 A0A0J9YWU9 116 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.56□□□□□ -1.84
FCF1-204ENST00000553673 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.56□□□□□ -1.84
FCF1-204ENST00000553673 C5orf52A6NGY3 159 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.56□□□□□ -1.84
FCF1-204ENST00000553673 NPIPA3F8WFD2 350 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 CCL24O00175 119 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 PSMA7O14818 248 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 CYTIPO60759 359 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 CEACAM4O75871 244 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 YEATS4O95619 227 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 MOCS2O96007 188 aaPredicted RBP3.56□□□□□ -1.84
FCF1-204ENST00000553673 CD59P13987 128 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 MUTP22033 750 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 PRKACGP22612 351 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 CD52P31358 61 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 LONP1P36776 959 aaKnown RBP3.56□□□□□ -1.84
FCF1-204ENST00000553673 SOX3P41225 446 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 GPC3P51654 580 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 CRYBB1P53674 252 aaPredicted RBP3.56□□□□□ -1.84
FCF1-204ENST00000553673 CLDN17P56750 224 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 GSCP56915 257 aaPredicted RBP3.56□□□□□ -1.84
FCF1-204ENST00000553673 NLRP11P59045 1033 aaKnown RBP3.56□□□□□ -1.84
FCF1-204ENST00000553673 PTENP60484 403 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 EMC2Q15006 297 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 STK38Q15208 465 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 LRIT3Q3SXY7 679 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 FASTKD1Q53R41 847 aaKnown RBP3.56□□□□□ -1.84
FCF1-204ENST00000553673 TMEM182Q6ZP80 229 aaPredicted RBP3.56□□□□□ -1.84
FCF1-204ENST00000553673 FAM47EQ6ZV65 393 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 GALNTL5Q7Z4T8 443 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 KRT77Q7Z794 578 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 ZER1Q7Z7L7 766 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 PRUNE1Q86TP1 453 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 LINC00301Q8NCQ3 95 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 TCP11Q8WWU5 503 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 DNASE1L2Q92874 299 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 ST6GALNAC6Q969X2 333 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 INTS14Q96SY0 518 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 PLIN2Q99541 437 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 PIGQQ9BRB3 760 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 GCOM2Q9BZD3 368 aaPredicted RBP3.56□□□□□ -1.84
FCF1-204ENST00000553673 TRIM15Q9C019 465 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 POLR3FQ9H1D9 316 aaPredicted RBP3.56□□□□□ -1.84
FCF1-204ENST00000553673 DHX33Q9H6R0 707 aaKnown RBP3.56□□□□□ -1.84
FCF1-204ENST00000553673 C10orf88Q9H8K7 445 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 ZWILCHQ9H900 591 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 XPNPEP1Q9NQW7 623 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 SPHK2Q9NRA0 654 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 DDX19AQ9NUU7 478 aaKnown RBP3.56□□□□□ -1.84
FCF1-204ENST00000553673 PANK4Q9NVE7 773 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 TEX10Q9NXF1 929 aaPredicted RBP3.56□□□□□ -1.84
FCF1-204ENST00000553673 HACD3Q9P035 362 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 LNPEPQ9UIQ6 1025 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 PLXNB2O15031 1838 aa3.56□□□□□ -1.84
FCF1-204ENST00000553673 E9PMD0 336 aa3.55□□□□□ -1.84
FCF1-204ENST00000553673 GLRA2P23416 452 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms