RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 IL20RAQ9UHF4 553 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 PLA2G4CQ9UP65 541 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 RAD54L2Q9Y4B4 1467 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 TMCO5BA8MYB1 307 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 NEDD8-MDP1E9PL57 170 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 SH2D1BO14796 132 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 TSPAN2O60636 221 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 FRAT2O75474 233 aaPredicted RBP4.24□□□□□ -1.73
SYNE2-210ENST00000553455 PROS1P07225 676 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 HIST1H2AGP0C0S8 130 aaPredicted RBP4.24□□□□□ -1.73
SYNE2-210ENST00000553455 DPEP1P16444 411 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 MAT2AP31153 395 aaKnown RBP4.24□□□□□ -1.73
SYNE2-210ENST00000553455 HSPA1LP34931 641 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 TRIM23P36406 574 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 NPY2RP49146 381 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 NDST1P52848 882 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 NDUFV3P56181 108 aaKnown RBP4.24□□□□□ -1.73
SYNE2-210ENST00000553455 CLPPQ16740 277 aaPredicted RBP4.24□□□□□ -1.73
SYNE2-210ENST00000553455 ECSCRQ19T08 205 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 MS4A18Q3C1V0 323 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 AGKQ53H12 422 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 LIPKQ5VXJ0 399 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 STEAP1BQ6NZ63 245 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 FAM159AQ6UWV7 190 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 RBM43Q6ZSC3 357 aaKnown RBP4.24□□□□□ -1.73
SYNE2-210ENST00000553455 GPR142Q7Z601 462 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.24□□□□□ -1.73
SYNE2-210ENST00000553455 RNF148Q8N7C7 305 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 COLGALT1Q8NBJ5 622 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 MINDY2Q8NBR6 621 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 OR56B1Q8NGI3 324 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 OR1K1Q8NGR3 316 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 RDH11Q8TC12 318 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 MIPOL1Q8TD10 442 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 LRRC15Q8TF66 581 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 HIST1H2ACQ93077 130 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 C14orf79Q96F83 325 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 THYN1Q9P016 225 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 ERVK-18Q9QC07 812 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 LHX3Q9UBR4 397 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 CLIP2Q9UDT6 1046 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 ENTPD4Q9Y227 616 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 SLC6A5Q9Y345 797 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 ATG4BQ9Y4P1 393 aa4.24□□□□□ -1.73
SYNE2-210ENST00000553455 IGLV4-3A0A075B6K6 122 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 IGHV3OR16-10A0A075B7F0 116 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 IGLON5A6NGN9 336 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 H7C423 109 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 RASGRF2O14827 1237 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 DCXO43602 365 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 SSX5O60225 188 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 B3GALNT1O75752 331 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 IGHG1P01857 330 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 TRIM49P0CI25 452 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 TRIM49CP0CI26 452 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 MBL2P11226 248 aaPredicted RBP4.23□□□□□ -1.73
SYNE2-210ENST00000553455 FUT1P19526 365 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 SLC6A8P48029 635 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 SRPXP78539 464 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 FUT7Q11130 342 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 POM121L1PQ3SYA9 428 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 CEP85LQ5SZL2 805 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 WDR25Q64LD2 544 aaPredicted RBP4.23□□□□□ -1.73
SYNE2-210ENST00000553455 RHBDD2Q6NTF9 364 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 TMEM26Q6ZUK4 368 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 NUFIP2Q7Z417 695 aaKnown RBP4.23□□□□□ -1.73
SYNE2-210ENST00000553455 AMZ2Q86W34 360 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 LMNTD2Q8IXW0 634 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 LINC00518Q8N0U6 118 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 PCNPQ8WW12 178 aaKnown RBP4.23□□□□□ -1.73
SYNE2-210ENST00000553455 DEFB118Q96PH6 123 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 CCDC28BQ9BUN5 200 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 ATG10Q9H0Y0 220 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 LIME1Q9H400 295 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 MIOXQ9UGB7 285 aa4.23□□□□□ -1.73
SYNE2-210ENST00000553455 MTF2Q9Y483 593 aaPredicted RBP4.23□□□□□ -1.73
SYNE2-210ENST00000553455 NTN3O00634 580 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-210ENST00000553455 DUSP11O75319 330 aaKnown RBP4.22□□□□□ -1.73
SYNE2-210ENST00000553455 CCDC159P0C7I6 412 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 GHRP10912 638 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 FOSL2P15408 326 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 CYP11B1P15538 503 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 CHRNA3P32297 505 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 ASMTP46597 345 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 SLC1A6P48664 564 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 ATP4BP51164 291 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 ZNF131P52739 623 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 SLC26A5P58743 744 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 CDKL1Q00532 357 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 FASTKQ14296 549 aaKnown RBP4.22□□□□□ -1.73
SYNE2-210ENST00000553455 PDIA5Q14554 519 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 SIX1Q15475 284 aaPredicted RBP4.22□□□□□ -1.73
SYNE2-210ENST00000553455 FCN2Q15485 313 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 CEBPEQ15744 281 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 ZSWIM7Q19AV6 140 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 UNC50Q53HI1 259 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 MUC21Q5SSG8 566 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 C12orf60Q5U649 245 aa4.22□□□□□ -1.73
SYNE2-210ENST00000553455 OLFM4Q6UX06 510 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms