RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SH2D1BO14796 132 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 UFL1O94874 794 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 NSD2O96028 1365 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 HPRP00739 348 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 TSHBP01222 138 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 IL1BP01584 269 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 MT-ND1P03886 318 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 CYP11B1P15538 503 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 TSPAN8P19075 237 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 PSMA2P25787 234 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 OR3A2P47893 321 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 PDLIM4P50479 330 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 VCPP55072 806 aaKnown RBP5.1□□□□□ -1.59
SCFD1-208ENST00000553278 ATP5IP56385 69 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-208ENST00000553278 KLF5Q13887 457 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-208ENST00000553278 SHROOM1Q2M3G4 852 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-208ENST00000553278 CARMIL1Q5VZK9 1371 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 SEL1L3Q68CR1 1132 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 CCDC73Q6ZRK6 1079 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 P4HA3Q7Z4N8 544 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 WDR49Q8IV35 697 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 DCLK2Q8N568 766 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 BHLHE23Q8NDY6 225 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 OR4D10Q8NGI6 311 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 OR4C3Q8NH37 302 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 TRMT10AQ8TBZ6 339 aaKnown RBP5.1□□□□□ -1.59
SCFD1-208ENST00000553278 PARD3Q8TEW0 1356 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 HPSE2Q8WWQ2 592 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 SUSD6Q92537 303 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 OSTF1Q92882 214 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 OMA1Q96E52 524 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 CCDC77Q9BR77 488 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 TBC1D10AQ9BXI6 508 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 TDRD1Q9BXT4 1180 aaKnown RBP5.1□□□□□ -1.59
SCFD1-208ENST00000553278 NCOR1P1Q9H4R4 102 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 KAT8Q9H7Z6 458 aaKnown RBP5.1□□□□□ -1.59
SCFD1-208ENST00000553278 EVA1AQ9H8M9 152 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 LPAR2Q9HBW0 351 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 POLD4Q9HCU8 107 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 AGPAT5Q9NUQ2 364 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 INTS9Q9NV88 658 aaKnown RBP5.1□□□□□ -1.59
SCFD1-208ENST00000553278 PLCL2Q9UPR0 1127 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 SLC6A5Q9Y345 797 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 TMED5Q9Y3A6 229 aa5.1□□□□□ -1.59
SCFD1-208ENST00000553278 GSAPA4D1B5 854 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 FAM47DPA6NHR8 397 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 SHISA7A6NL88 538 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 LMO7DNF2Z398 122 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 CLDN5O00501 218 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 JAK2O60674 1132 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 B4GALT2O60909 372 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 SNNO75324 88 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-208ENST00000553278 BCAS1O75363 584 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-208ENST00000553278 ANXA9O76027 345 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 STK17BO94768 372 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 ZBTB11O95625 1053 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-208ENST00000553278 GOT2P00505 430 aaKnown RBP5.09□□□□□ -1.59
SCFD1-208ENST00000553278 CALCAP01258 141 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 FCER2P06734 321 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 GIFP27352 417 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 MTIF2P46199 727 aaKnown RBP5.09□□□□□ -1.59
SCFD1-208ENST00000553278 FHITP49789 147 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 NDST1P52848 882 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 ACTR3P61158 418 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 BTG1P62324 171 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 RPS4XP62701 263 aaKnown RBP5.09□□□□□ -1.59
SCFD1-208ENST00000553278 POU3F1Q03052 451 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-208ENST00000553278 SRYQ05066 204 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 LTBQ06643 244 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 SELPLGQ14242 412 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 P2RY6Q15077 328 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 P2RY14Q15391 338 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 SPANXN4Q5MJ08 99 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 SYCE2Q6PIF2 218 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 Q6ZVQ6 151 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 EFL1Q7Z2Z2 1120 aaKnown RBP5.09□□□□□ -1.59
SCFD1-208ENST00000553278 EFCAB13Q8IY85 973 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 LINC00518Q8N0U6 118 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 ARFGAP2Q8N6H7 521 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 DMBX1Q8NFW5 382 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 OR13A1Q8NGR1 328 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 MRPL24Q96A35 216 aaKnown RBP5.09□□□□□ -1.59
SCFD1-208ENST00000553278 SLC25A36Q96CQ1 311 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 SLC41A3Q96GZ6 507 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 SENP5Q96HI0 755 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-208ENST00000553278 LRR1Q96L50 414 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 ZNF354BQ96LW1 612 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 DUX5Q96PT3 197 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 UHRF2Q96PU4 802 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 TRPV5Q9NQA5 729 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 PPP2R2CQ9Y2T4 447 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 FKBP7Q9Y680 259 aa5.09□□□□□ -1.59
SCFD1-208ENST00000553278 hCG_38984A0A1B0GV85 526 aa5.08□□□□□ -1.6
SCFD1-208ENST00000553278 MEI4A8MW99 385 aa5.08□□□□□ -1.6
SCFD1-208ENST00000553278 NPIPA2E9PIF3 369 aa5.08□□□□□ -1.6
SCFD1-208ENST00000553278 CHRNA1P02708 482 aa5.08□□□□□ -1.6
SCFD1-208ENST00000553278 GPIP06744 558 aa5.08□□□□□ -1.6
SCFD1-208ENST00000553278 UMODP07911 640 aa5.08□□□□□ -1.6
SCFD1-208ENST00000553278 SLC35G4P0C7Q5 338 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms