RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 COA3Q9Y2R0 106 aaPredicted RBP4.71□□□□□ -1.66
CKAP4-203ENST00000553039 WBP11Q9Y2W2 641 aaKnown RBP4.71□□□□□ -1.66
CKAP4-203ENST00000553039 HRNRQ86YZ3 2850 aaPredicted RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 C22orf46C9J442 243 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 H7C0S8 307 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 TRIM77I1YAP6 450 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 WWP2O00308 870 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 EPHB6O15197 1021 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 CHST10O43529 356 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 SSX4O60224 188 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 OR10H2O60403 315 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 GPC4O75487 556 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 C1orf105O95561 183 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 C1QAP02745 245 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 CSTBP04080 98 aaKnown RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 CD48P09326 243 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 POU2F1P14859 743 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 IL1RNP18510 177 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 USF1P22415 310 aaPredicted RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 UGT2B10P36537 528 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 CPOXP36551 454 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 RBMXP38159 391 aaKnown RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 SOX3P41225 446 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 TRPC1P48995 793 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 NR2C2P49116 596 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 GEMP55040 296 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 WNT3P56703 355 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 RPS15AP62244 130 aaKnown RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 SLC25A11Q02978 314 aaKnown RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 TSTA3Q13630 321 aaPredicted RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 BMPR2Q13873 1038 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 PRPSAP1Q14558 356 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 ADRM1Q16186 407 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 C3orf36Q3SXR2 165 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 ANKRD20A4Q4UJ75 823 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 ODF2Q5BJF6 829 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 ANKRD20A2Q5SQ80 823 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 ANKRD20A1Q5TYW2 823 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 ANKRD20A3Q5VUR7 823 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 ZNF425Q6IV72 752 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 MZT2BQ6NZ67 158 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 PGBD2Q6P3X8 592 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 CFAP161Q6P656 301 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 RANBP10Q6VN20 620 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 PACS1Q6VY07 963 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 QSOX2Q6ZRP7 698 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 C1orf122Q6ZSJ8 110 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 DND1Q8IYX4 353 aaKnown RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 LRRC25Q8N386 305 aaPredicted RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 TMEM132CQ8N3T6 1108 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 PQLC3Q8N755 202 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 NIPA2Q8N8Q9 360 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 APCDD1LQ8NCL9 501 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 C7orf57Q8NEG2 295 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 PHOSPHO1Q8TCT1 267 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 SMAP2Q8WU79 429 aaPredicted RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 TFB1MQ8WVM0 346 aaKnown RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 SLC13A3Q8WWT9 602 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 ASB11Q8WXH4 323 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 AKAP1Q92667 903 aaKnown RBP eCLIP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 KAT2AQ92830 837 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 ABTB1Q969K4 478 aaPredicted RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 CDKN2AIPNLQ96HQ2 116 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 ADAD1Q96M93 576 aaKnown RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 JSRP1Q96MG2 331 aaPredicted RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 RASL10BQ96S79 203 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 FERMT1Q9BQL6 677 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 TMEM120AQ9BXJ8 343 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 GANQ9H2C0 597 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 POFUT1Q9H488 388 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 CHODLQ9H9P2 273 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 EML4Q9HC35 981 aaKnown RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 PNO1Q9NRX1 252 aaKnown RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 FAIMQ9NVQ4 179 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 KLHL8Q9P2G9 620 aaPredicted RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 IMPACTQ9P2X3 320 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 CIDEBQ9UHD4 219 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 SCOCQ9UIL1 159 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 PPIEQ9UNP9 301 aaKnown RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 AAR2Q9Y312 384 aaKnown RBP4.7□□□□□ -1.66
CKAP4-203ENST00000553039 NAALAD2Q9Y3Q0 740 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 ATG4BQ9Y4P1 393 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 CUBNO60494 3623 aa4.7□□□□□ -1.66
CKAP4-203ENST00000553039 A0A1W2PP18 115 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 A0A1W2PPV9 198 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 C3orf70A6NLC5 250 aaPredicted RBP4.69□□□□□ -1.66
CKAP4-203ENST00000553039 GOLGA6L19H0YKK7 550 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 APOL1O14791 398 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 RDH16O75452 317 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 MYO1DO94832 1006 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 ACSL3O95573 720 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 ACTL6AO96019 429 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 TGFAP01135 160 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 IGHV4-39P01824 125 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 LPLP06858 475 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 RFPL3SP0C7P2 107 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 DHRS4L1P0CG22 281 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 CCDC166P0CW27 439 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 IGHV4-31P0DP07 118 aa4.69□□□□□ -1.66
CKAP4-203ENST00000553039 TCF4P15884 667 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms