RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	FOLH1	Q04609	750 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	ELOA	Q14241	798 aa	Known RBP	11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	GPR19	Q15760	415 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	NKG7	Q16617	165 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	LRRC36	Q1X8D7	754 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	PROX2	Q3B8N5	592 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	CMPK2	Q5EBM0	449 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	TMEM107	Q6UX40	140 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	IZUMO2	Q6UXV1	221 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	CEACAM20	Q6UY09	585 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	CBLL1	Q75N03	491 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	CCDC80	Q76M96	950 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	TMEM52	Q8NDY8	209 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	OR9A2	Q8NGT5	310 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	NFKBID	Q8NI38	313 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	MIPOL1	Q8TD10	442 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	TBC1D20	Q96BZ9	403 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	ELP4	Q96EB1	424 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	CENPN	Q96H22	339 aa	Predicted RBP	11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	PYURF	Q96I23	114 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	GTPBP2	Q9BX10	602 aa	Known RBP	11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	SEMA6A	Q9H2E6	1030 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	ARRDC1-AS1	Q9H2J1	176 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	CNOT11	Q9UKZ1	510 aa	Known RBP	11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	ADAMTS20	P59510	1910 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	FAM227A	F5H4B4	570 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480		H0YIG0	161 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	PLOD2	O00469	737 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	HMGN4	O00479	90 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	GALR2	O43603	387 aa	Predicted RBP	11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	OR2B3	O76000	313 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	SLITRK5	O94991	958 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	CPNE6	O95741	557 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	ZNF682	O95780	498 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	LDLR	P01130	860 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	RPLP0	P05388	317 aa	Known RBP	11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	IFI6	P09912	130 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	ZNF883	P0CG24	379 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	ACADS	P16219	412 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	PPP2R1B	P30154	601 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	MC3R	P41968	323 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	GCGR	P47871	477 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	RPS26	P62854	115 aa	Known RBP	11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	CCL7	P80098	99 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	DAB2	P98082	770 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	TAF11	Q15544	211 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	LTB4R	Q15722	352 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	CLPP	Q16740	277 aa	Predicted RBP	11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	FAM214A	Q32MH5	1076 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	YOD1	Q5VVQ6	348 aa	Predicted RBP	11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	TLDC1	Q6P9B6	456 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	FKBP9P1	Q75LS8	142 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	SZRD1	Q7Z422	152 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	ZC3H7A	Q8IWR0	971 aa	Known RBP	11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	OR4N5	Q8IXE1	308 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	METTL25	Q8N6Q8	603 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	NUP43	Q8NFH3	380 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	OR4D9	Q8NGE8	314 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	OR1L3	Q8NH93	324 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	IFI44	Q8TCB0	444 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	VCX	Q9H320	206 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	OR51I1	Q9H343	314 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	LRRN3	Q9H3W5	708 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	SERHL2	Q9H4I8	314 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	FANCE	Q9HB96	536 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	CUTC	Q9NTM9	273 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	ADPRHL2	Q9NX46	363 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	NTM	Q9P121	344 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	HCN3	Q9P1Z3	774 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	PTGFRN	Q9P2B2	879 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	PDP2	Q9P2J9	529 aa		11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480	MRPS33	Q9Y291	106 aa	Known RBP	11.93	□□□□□ -0.5
CACNB3-223	ENST00000552480		A0A0C4DFX4	3053 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480		A0A1W2PQM1	296 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	TMEM247	A6NEH6	219 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480		A8MU76	341 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	C5orf58	C9J3I9	102 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	TNFRSF10A	O00220	468 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	KHNYN	O15037	678 aa	Known RBP	11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	CLOCK	O15516	846 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	LDB3	O75112	727 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	DEAF1	O75398	565 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	GCM2	O75603	506 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	IFNA14	P01570	189 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	SEMG1	P04279	462 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	ATP1B1	P05026	303 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	FOLR1	P15328	257 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	ATP6V1C1	P21283	382 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	MATN1	P21941	496 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	PTGER1	P34995	402 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	MAGEA2	P43356	314 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	NUBP1	P53384	320 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	ITGA1	P56199	1179 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	PCBP3	P57721	371 aa	Known RBP	11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	MYBPC3	Q14896	1274 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	CYBRD1	Q53TN4	286 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	SFT2D3	Q587I9	215 aa		11.92	□□□□□ -0.5
CACNB3-223	ENST00000552480	CRB2	Q5IJ48	1285 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms