RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 IRF2BP2Q7Z5L9 587 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 HAPLN4Q86UW8 402 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 PIM3Q86V86 326 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 DNAAF5Q86Y56 855 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 EPHX4Q8IUS5 362 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 KLHDC8BQ8IXV7 354 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 CEP57L1Q8IYX8 460 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 Q8N9G6 341 aaPredicted RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 POMGNT2Q8NAT1 580 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 AVL9Q8NBF6 648 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 MCUQ8NE86 351 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 OR8K5Q8NH50 307 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 OR14L1PQ8NHC6 308 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 DTX3LQ8TDB6 740 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 SLC37A2Q8TED4 501 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 SSC4DQ8WTU2 575 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 NSMCE1Q8WV22 266 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 APOBEC4Q8WW27 367 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 IGFBPL1Q8WX77 278 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 STARD8Q92502 1023 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 COQ8BQ96D53 544 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 SNRNP40Q96DI7 357 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ELMOD3Q96FG2 381 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 DTD2Q96FN9 168 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 METTL2AQ96IZ6 378 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 C9orf72Q96LT7 481 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 LRFN5Q96NI6 719 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 CATSPER2Q96P56 530 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 NUDCD1Q96RS6 583 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 CMKLR1Q99788 373 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 CTRCQ99895 268 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 SRSF8Q9BRL6 282 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 PCGF1Q9BSM1 259 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 WRAP53Q9BUR4 548 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 NUDT9Q9BW91 350 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 C1QTNF5Q9BXJ0 243 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 KRTAP4-11Q9BYQ6 195 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ABCG4Q9H172 646 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 ABCG8Q9H221 673 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 OSGEPL1Q9H4B0 414 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 PLK3Q9H4B4 646 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 CATSPERBQ9H7T0 1116 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 EPB41L5Q9HCM4 733 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 SLC40A1Q9NP59 571 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 KRCC1Q9NPI7 259 aaPredicted RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 SLC35C2Q9NQQ7 365 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 TMEM51Q9NW97 253 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 DONSONQ9NYP3 566 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 CPSF2Q9P2I0 782 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 NFKBIL1Q9UBC1 381 aaPredicted RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 COPG2Q9UBF2 871 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 IL36RNQ9UBH0 155 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 HEY2Q9UBP5 337 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 DNAJC12Q9UKB3 198 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 CFAP45Q9UL16 551 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 TTC7AQ9ULT0 858 aaPredicted RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 WDR37Q9Y2I8 494 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 CSAG2Q9Y5P2 127 aa2.24□□□□□ -2.05
CPSF6-207ENST00000551516 TDRD6O60522 2096 aaKnown RBP2.24□□□□□ -2.05
CPSF6-207ENST00000551516 CSPG4Q6UVK1 2322 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 IGHV5-51A0A0C4DH38 117 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 IGLV5-39A0A0G2JS06 123 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 A0A1W2PQ72 361 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 RPS10-NUDT3A0A1W2PQS6 291 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 C1orf226A1L170 272 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 OR2A25A4D2G3 310 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 ZSCAN5CA6NGD5 496 aaPredicted RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 MASP2O00187 686 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 PSMD11O00231 422 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 TOX3O15405 576 aaPredicted RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 CREG1O75629 220 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 TPPPO94811 219 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 PGLSO95336 258 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 PGM3O95394 542 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 LSM8O95777 96 aaKnown RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 TNFP01375 233 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 APOA4P06727 396 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 STSP08842 583 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 NAGAP17050 411 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 ERCC2P18074 760 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 NELFEP18615 380 aaKnown RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 ANXA7P20073 488 aaKnown RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 IL11P20809 199 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 HNRNPH3P31942 346 aaKnown RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 RPL3P39023 403 aaKnown RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 CAPZA2P47755 286 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 TDGF1P3P51864 188 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 P2RX3P56373 397 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 SLC8A3P57103 927 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 SELENOVP59797 346 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 ZP1P60852 638 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 SNRPD1P62314 119 aaKnown RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 MRPS34P82930 218 aaKnown RBP2.23□□□□□ -2.05
CPSF6-207ENST00000551516 ADORA2A-AS1P86434 159 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 CDR2Q01850 454 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 Q0VFX4 171 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 ABRQ12979 859 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 GPS2Q13227 327 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 SGCGQ13326 291 aa2.23□□□□□ -2.05
CPSF6-207ENST00000551516 GPR18Q14330 331 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms