RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 HPF1Q9NWY4 346 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 MCM8Q9UJA3 840 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 ERVK-19Q9WJR5 959 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 PLLPQ9Y342 182 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 PCDHA9Q9Y5H5 950 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 ICE1Q9Y2F5 2266 aa15.99■□□□□ 0.15
CHMP1A-208ENST00000550102 C1orf226A1L170 272 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 GOLGA6L10A6NI86 522 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 WASHC1A8K0Z3 465 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 HRKO00198 91 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 PCDH7O60245 1069 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 CHN1P15882 459 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 SOX3P41225 446 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 TRA2BP62995 288 aaKnown RBP15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 HMGCS1Q01581 520 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 ZNF267Q14586 743 aaPredicted RBP15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 SLC48A1Q6P1K1 146 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 GFRALQ6UXV0 394 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 SLC29A4Q7RTT9 530 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 C10orf107Q8IVU9 208 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 GALNT12Q8IXK2 581 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 C9orf40Q8IXQ3 194 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 CHTF18Q8WVB6 975 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 UCN3Q969E3 161 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 SMC6Q96SB8 1091 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 TMEM109Q9BVC6 243 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 TIMMDC1Q9NPL8 285 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 SEC14L3Q9UDX4 400 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 RAB21Q9UL25 225 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 OSGIN2Q9Y236 505 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 SLC5A6Q9Y289 635 aa15.98■□□□□ 0.15
CHMP1A-208ENST00000550102 GNG14A0A1W2PPG7 69 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 A0A1W2PS29 197 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 SERTM1A2A2V5 107 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 OR6C76A6NM76 312 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 OR6B1O95007 311 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 UNC5CO95185 931 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 TUBBP07437 444 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 CPMP14384 443 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 ZNF24P17028 368 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 TIA1P31483 386 aaKnown RBP eCLIP15.97■□□□□ 0.156e-7■■□□□ 11.8
CHMP1A-208ENST00000550102 DEKP35659 375 aaKnown RBP15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 ALDH9A1P49189 494 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 FOXA1P55317 472 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 KCNK10P57789 538 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 ALDH6A1Q02252 535 aaKnown RBP15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 IMPG1Q17R60 797 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 OPN5Q6U736 354 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 MMP21Q8N119 569 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 POGLUT1Q8NBL1 392 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 SLC22A8Q8TCC7 542 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 KLHL29Q96CT2 875 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 FAM111AQ96PZ2 611 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 GAL3ST4Q96RP7 486 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 TRMOQ9BU70 441 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 CXorf21Q9HAI6 301 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 PSME2Q9UL46 239 aa15.97■□□□□ 0.15
CHMP1A-208ENST00000550102 KLRC4-KLRK1H3BQV0 150 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 TRIM13O60858 407 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 SPAG7O75391 227 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 PORP16435 677 aaPredicted RBP15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 MEOX1P50221 254 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 XKP51811 444 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 SLC37A1P57057 533 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 SRSF11Q05519 484 aaKnown RBP15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 RBPJQ06330 500 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 MPEG1Q2M385 716 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 KRT71Q3SY84 523 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 C4orf17Q53FE4 359 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 SPDYAQ5MJ70 313 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 SCIMPQ6UWF3 145 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 IL20RBQ6UXL0 311 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 RTL4Q6ZR62 310 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 MDGA2Q7Z553 956 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 CPSF7Q8N684 471 aaKnown RBP15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 PSD4Q8NDX1 1056 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 DOK4Q8TEW6 326 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 TM4SF18Q96CE8 201 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 WWTR1Q9GZV5 400 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 TSPAN10Q9H1Z9 355 aaPredicted RBP15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 RYDENQ9NUL5 291 aaKnown RBP15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 SENP1Q9P0U3 644 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 ERRFI1Q9UJM3 462 aaPredicted RBP15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 CES1P1Q9UKY3 287 aa15.96■□□□□ 0.15
CHMP1A-208ENST00000550102 GTF3C1Q12789 2109 aa15.95■□□□□ 0.14
CHMP1A-208ENST00000550102 ERAL1O75616 437 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-208ENST00000550102 ATP1B1P05026 303 aa15.95■□□□□ 0.14
CHMP1A-208ENST00000550102 IL3P08700 152 aa15.95■□□□□ 0.14
CHMP1A-208ENST00000550102 STSP08842 583 aa15.95■□□□□ 0.14
CHMP1A-208ENST00000550102 UROSP10746 265 aa15.95■□□□□ 0.14
CHMP1A-208ENST00000550102 CSNK2A2P19784 350 aaPredicted RBP15.95■□□□□ 0.14
CHMP1A-208ENST00000550102 NT5EP21589 574 aa15.95■□□□□ 0.14
CHMP1A-208ENST00000550102 GSTM5P46439 218 aa15.95■□□□□ 0.14
CHMP1A-208ENST00000550102 PER3P56645 1201 aa15.95■□□□□ 0.14
CHMP1A-208ENST00000550102 RAE1P78406 368 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-208ENST00000550102 ZNF844Q08AG5 666 aa15.95■□□□□ 0.14
CHMP1A-208ENST00000550102 EBPQ15125 230 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-208ENST00000550102 GALNT18Q6P9A2 607 aa15.95■□□□□ 0.14
CHMP1A-208ENST00000550102 SIAH3Q8IW03 269 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms