RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 OR52E8Q6IFG1 317 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 PAOXQ6QHF9 649 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 RNF111Q6ZNA4 994 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 SLC29A4Q7RTT9 530 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 MILR1Q7Z6M3 343 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 SDCCAG3Q96C92 435 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 MRPL1Q9BYD6 325 aaKnown RBP15.09■□□□□ 0.01
VPS29-207ENST00000549970 ELOVL6Q9H5J4 265 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 ZDHHC11Q9H8X9 412 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 TEX10Q9NXF1 929 aaPredicted RBP15.09■□□□□ 0.01
VPS29-207ENST00000549970 HRH3Q9Y5N1 445 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 MYO9AB2RTY4 2548 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 A0A1B0GTL3 188 aa15.08■□□□□ 0
VPS29-207ENST00000549970 A8MT66 165 aa15.08■□□□□ 0
VPS29-207ENST00000549970 C19orf84I3L1E1 186 aa15.08■□□□□ 0
VPS29-207ENST00000549970 KIF2AO00139 706 aaPredicted RBP15.08■□□□□ 0
VPS29-207ENST00000549970 PPP6CO00743 305 aa15.08■□□□□ 0
VPS29-207ENST00000549970 PGRMC2O15173 223 aa15.08■□□□□ 0
VPS29-207ENST00000549970 GLSO94925 669 aaPredicted RBP15.08■□□□□ 0
VPS29-207ENST00000549970 NADKO95544 446 aaPredicted RBP15.08■□□□□ 0
VPS29-207ENST00000549970 KLK1P06870 262 aa15.08■□□□□ 0
VPS29-207ENST00000549970 SBK3P0C264 359 aa15.08■□□□□ 0
VPS29-207ENST00000549970 TNFRSF8P28908 595 aa15.08■□□□□ 0
VPS29-207ENST00000549970 MAGEA5P43359 124 aa15.08■□□□□ 0
VPS29-207ENST00000549970 GGTA1PQ4G0N0 100 aa15.08■□□□□ 0
VPS29-207ENST00000549970 NDUFAF5Q5TEU4 345 aa15.08■□□□□ 0
VPS29-207ENST00000549970 FAM219BQ5XKK7 198 aa15.08■□□□□ 0
VPS29-207ENST00000549970 LETMD1Q6P1Q0 360 aa15.08■□□□□ 0
VPS29-207ENST00000549970 RGS9BPQ6ZS82 235 aa15.08■□□□□ 0
VPS29-207ENST00000549970 TMEM251Q8N6I4 163 aa15.08■□□□□ 0
VPS29-207ENST00000549970 WWTR1Q9GZV5 400 aa15.08■□□□□ 0
VPS29-207ENST00000549970 TP63Q9H3D4 680 aaPredicted RBP15.08■□□□□ 0
VPS29-207ENST00000549970 IL1RL2Q9HB29 575 aa15.08■□□□□ 0
VPS29-207ENST00000549970 TUBA8Q9NY65 449 aaPredicted RBP15.08■□□□□ 0
VPS29-207ENST00000549970 AHSPQ9NZD4 102 aa15.08■□□□□ 0
VPS29-207ENST00000549970 COQ3Q9NZJ6 369 aa15.08■□□□□ 0
VPS29-207ENST00000549970 SLC12A4Q9UP95 1085 aa15.08■□□□□ 0
VPS29-207ENST00000549970 LIPGQ9Y5X9 500 aa15.08■□□□□ 0
VPS29-207ENST00000549970 ABCA12Q86UK0 2595 aa15.07■□□□□ 0
VPS29-207ENST00000549970 NPIPA2E9PIF3 369 aa15.07■□□□□ 0
VPS29-207ENST00000549970 NPIPA3F8WFD2 350 aa15.07■□□□□ 0
VPS29-207ENST00000549970 OTCP00480 354 aa15.07■□□□□ 0
VPS29-207ENST00000549970 SLC35E2P0CK97 266 aa15.07■□□□□ 0
VPS29-207ENST00000549970 PIK3R1P27986 724 aa15.07■□□□□ 0
VPS29-207ENST00000549970 PIGAP37287 484 aa15.07■□□□□ 0
VPS29-207ENST00000549970 SLC37A1P57057 533 aa15.07■□□□□ 0
VPS29-207ENST00000549970 EBPQ15125 230 aaKnown RBP15.07■□□□□ 0
VPS29-207ENST00000549970 ZNF791Q3KP31 576 aaPredicted RBP15.07■□□□□ 0
VPS29-207ENST00000549970 CCNYL2Q5T2Q4 361 aa15.07■□□□□ 0
VPS29-207ENST00000549970 C10orf62Q5T681 223 aaPredicted RBP15.07■□□□□ 0
VPS29-207ENST00000549970 LGSNQ5TDP6 509 aa15.07■□□□□ 0
VPS29-207ENST00000549970 PRAMEF20Q5VT98 475 aa15.07■□□□□ 0
VPS29-207ENST00000549970 LYPD8Q6UX82 237 aa15.07■□□□□ 0
VPS29-207ENST00000549970 PAGE2Q7Z2X7 111 aa15.07■□□□□ 0
VPS29-207ENST00000549970 FAM109AQ8N4B1 249 aa15.07■□□□□ 0
VPS29-207ENST00000549970 MARVELD2Q8N4S9 558 aa15.07■□□□□ 0
VPS29-207ENST00000549970 SLC15A4Q8N697 577 aa15.07■□□□□ 0
VPS29-207ENST00000549970 CEP112Q8N8E3 955 aa15.07■□□□□ 0
VPS29-207ENST00000549970 FAM13CQ8NE31 585 aa15.07■□□□□ 0
VPS29-207ENST00000549970 KIF18AQ8NI77 898 aa15.07■□□□□ 0
VPS29-207ENST00000549970 ZNF483Q8TF39 744 aaPredicted RBP15.07■□□□□ 0
VPS29-207ENST00000549970 CA5BP1Q8WTZ4 195 aa15.07■□□□□ 0
VPS29-207ENST00000549970 SELENOMQ8WWX9 145 aa15.07■□□□□ 0
VPS29-207ENST00000549970 SPACA9Q96E40 222 aaPredicted RBP15.07■□□□□ 0
VPS29-207ENST00000549970 FARSBQ9NSD9 589 aaKnown RBP15.07■□□□□ 0
VPS29-207ENST00000549970 FBN2P35556 2912 aa15.06■□□□□ 0
VPS29-207ENST00000549970 APCP25054 2843 aa15.06■□□□□ 0
VPS29-207ENST00000549970 ATP6AP2A0A1C7CYW4 349 aa15.06■□□□□ 0
VPS29-207ENST00000549970 ATP6AP2O75787 350 aa15.06■□□□□ 0
VPS29-207ENST00000549970 PDYNP01213 254 aa15.06■□□□□ 0
VPS29-207ENST00000549970 CLPSP04118 112 aa15.06■□□□□ 0
VPS29-207ENST00000549970 ABHD2P08910 425 aa15.06■□□□□ 0
VPS29-207ENST00000549970 CELA3AP09093 270 aa15.06■□□□□ 0
VPS29-207ENST00000549970 GCAP28676 217 aa15.06■□□□□ 0
VPS29-207ENST00000549970 SSTR4P31391 388 aa15.06■□□□□ 0
VPS29-207ENST00000549970 PTGER4P35408 488 aa15.06■□□□□ 0
VPS29-207ENST00000549970 FOXO1Q12778 655 aa15.06■□□□□ 0
VPS29-207ENST00000549970 EMC4Q5J8M3 183 aa15.06■□□□□ 0
VPS29-207ENST00000549970 SLC22A10Q63ZE4 541 aa15.06■□□□□ 0
VPS29-207ENST00000549970 GDF7Q7Z4P5 450 aa15.06■□□□□ 0
VPS29-207ENST00000549970 GALNT12Q8IXK2 581 aa15.06■□□□□ 0
VPS29-207ENST00000549970 IFT20Q8IY31 132 aa15.06■□□□□ 0
VPS29-207ENST00000549970 METTL4Q8N3J2 472 aa15.06■□□□□ 0
VPS29-207ENST00000549970 RPRMLQ8N4K4 120 aa15.06■□□□□ 0
VPS29-207ENST00000549970 TMEM151AQ8N4L1 468 aa15.06■□□□□ 0
VPS29-207ENST00000549970 OR10G3Q8NGC4 313 aa15.06■□□□□ 0
VPS29-207ENST00000549970 OR4K14Q8NGD5 310 aa15.06■□□□□ 0
VPS29-207ENST00000549970 OR5M9Q8NGP3 310 aa15.06■□□□□ 0
VPS29-207ENST00000549970 OR5M3Q8NGP4 307 aa15.06■□□□□ 0
VPS29-207ENST00000549970 TRPC4APQ8TEL6 797 aa15.06■□□□□ 0
VPS29-207ENST00000549970 SMC6Q96SB8 1091 aa15.06■□□□□ 0
VPS29-207ENST00000549970 HBEGFQ99075 208 aa15.06■□□□□ 0
VPS29-207ENST00000549970 CXorf21Q9HAI6 301 aa15.06■□□□□ 0
VPS29-207ENST00000549970 SH2D2AQ9NP31 389 aa15.06■□□□□ 0
VPS29-207ENST00000549970 TMEM216Q9P0N5 145 aa15.06■□□□□ 0
VPS29-207ENST00000549970 TNFRSF10DQ9UBN6 386 aa15.06■□□□□ 0
VPS29-207ENST00000549970 ADAM29Q9UKF5 820 aa15.06■□□□□ 0
VPS29-207ENST00000549970 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.06■□□□□ 0
VPS29-207ENST00000549970 CSMD2Q7Z408 3487 aa15.05■□□□□ 0
VPS29-207ENST00000549970 OR6C76A6NM76 312 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms