RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 BIKQ13323 160 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 SQLEQ14534 574 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 ELAVL1Q15717 326 aaKnown RBP19.81■□□□□ 0.76
VPS29-206ENST00000549578 LTB4RQ15722 352 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 CEBPEQ15744 281 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 SPANXN4Q5MJ08 99 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 PIGWQ7Z7B1 504 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 SAMD14Q8IZD0 417 aaPredicted RBP19.81■□□□□ 0.76
VPS29-206ENST00000549578 SUN3Q8TAQ9 357 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 PTPMT1Q8WUK0 201 aaPredicted RBP19.81■□□□□ 0.76
VPS29-206ENST00000549578 THAP4Q8WY91 577 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 TESCQ96BS2 214 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 COQ8BQ96D53 544 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 CNTNAP3BQ96NU0 1288 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 IP6K3Q96PC2 410 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 ZBTB18Q99592 522 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 PRPF18Q99633 342 aaKnown RBP19.81■□□□□ 0.76
VPS29-206ENST00000549578 LPAR4Q99677 370 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 CNTNAP3Q9BZ76 1288 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 ZNF160Q9HCG1 818 aa19.81■□□□□ 0.76
VPS29-206ENST00000549578 LOC400499M0QZD8 3231 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 NSG1A0A0A6YYJ2 146 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 SYNDIG1LA6NDD5 238 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 MYO1GB0I1T2 1018 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 C17orf105B2RV13 164 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 K7ENP7 123 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 FAM107AO95990 144 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 NT5EP21589 574 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 NTSP30990 170 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 MRPL19P49406 292 aaKnown RBP19.8■□□□□ 0.76
VPS29-206ENST00000549578 ATP4BP51164 291 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 NCBP2P52298 156 aaKnown RBP eCLIP19.8■□□□□ 0.76
VPS29-206ENST00000549578 UCNP55089 124 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 FAM174BQ3ZCQ3 159 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 CPZQ66K79 652 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 INO80CQ6PI98 192 aaPredicted RBP19.8■□□□□ 0.76
VPS29-206ENST00000549578 NDUFAF7Q7L592 441 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 CAMKMTQ7Z624 323 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 ADCY4Q8NFM4 1077 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 PELOQ9BRX2 385 aaKnown RBP19.8■□□□□ 0.76
VPS29-206ENST00000549578 DUSP26Q9BV47 211 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 ATAD3AQ9NVI7 634 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 CLCA3PQ9Y6N3 262 aa19.8■□□□□ 0.76
VPS29-206ENST00000549578 ZZEF1O43149 2961 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 PTPRQQ9UMZ3 2332 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 SAGE2PA6NJ88 616 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 ATP1B1P05026 303 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 ZFP36L2P47974 494 aaKnown RBP19.79■□□□□ 0.76
VPS29-206ENST00000549578 PGDP52209 483 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 DGKQP52824 942 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 DEFB109BQ30KR1 87 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 OR4F3Q6IEY1 312 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 MTERF4Q7Z6M4 381 aaKnown RBP19.79■□□□□ 0.76
VPS29-206ENST00000549578 C7orf57Q8NEG2 295 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 OR9A2Q8NGT5 310 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 RIT1Q92963 219 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 VPS50Q96JG6 964 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 AMDHD1Q96NU7 426 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 BHLHE41Q9C0J9 482 aaPredicted RBP19.79■□□□□ 0.76
VPS29-206ENST00000549578 GLIPR2Q9H4G4 154 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 POLHQ9Y253 713 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 MAN2B2Q9Y2E5 1009 aa19.79■□□□□ 0.76
VPS29-206ENST00000549578 MAP1BP46821 2468 aaKnown RBP19.79■□□□□ 0.76
VPS29-206ENST00000549578 ARGFXA6NJG6 315 aa19.78■□□□□ 0.76
VPS29-206ENST00000549578 HPP00738 406 aa19.78■□□□□ 0.76
VPS29-206ENST00000549578 CT62P0C5K7 136 aa19.78■□□□□ 0.76
VPS29-206ENST00000549578 CD1EP15812 388 aa19.78■□□□□ 0.76
VPS29-206ENST00000549578 DDX5P17844 614 aaKnown RBP19.78■□□□□ 0.76
VPS29-206ENST00000549578 MPIP34949 423 aa19.78■□□□□ 0.76
VPS29-206ENST00000549578 KIR3DL1P43629 444 aa19.78■□□□□ 0.76
VPS29-206ENST00000549578 PHC1P78364 1004 aa19.78■□□□□ 0.76
VPS29-206ENST00000549578 SRSF11Q05519 484 aaKnown RBP19.78■□□□□ 0.76
VPS29-206ENST00000549578 VAC14Q08AM6 782 aa19.78■□□□□ 0.76
VPS29-206ENST00000549578 UBAP2LQ14157 1087 aaKnown RBP19.78■□□□□ 0.76
VPS29-206ENST00000549578 ZNF551Q7Z340 670 aaPredicted RBP19.78■□□□□ 0.76
VPS29-206ENST00000549578 GLB1L3Q8NCI6 653 aaPredicted RBP19.78■□□□□ 0.76
VPS29-206ENST00000549578 IMMP1LQ96LU5 166 aa19.78■□□□□ 0.76
VPS29-206ENST00000549578 TUBB6Q9BUF5 446 aa19.78■□□□□ 0.76
VPS29-206ENST00000549578 NMUR2Q9GZQ4 415 aa19.78■□□□□ 0.76
VPS29-206ENST00000549578 CXorf21Q9HAI6 301 aa19.78■□□□□ 0.76
VPS29-206ENST00000549578 SAR1AQ9NR31 198 aa19.78■□□□□ 0.76
VPS29-206ENST00000549578 CCDC167Q9P0B6 97 aa19.78■□□□□ 0.76
VPS29-206ENST00000549578 HRKO00198 91 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 CELA2AP08217 269 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 S100A3P33764 101 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 FRKP42685 505 aaPredicted RBP19.77■□□□□ 0.76
VPS29-206ENST00000549578 WNT3P56703 355 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 SLC26A5P58743 744 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 CXADRP78310 365 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 IRX1P78414 480 aaPredicted RBP19.77■□□□□ 0.76
VPS29-206ENST00000549578 HSPB3Q12988 150 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 CHAF1BQ13112 559 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 ZNF267Q14586 743 aaPredicted RBP19.77■□□□□ 0.76
VPS29-206ENST00000549578 TERF2Q15554 542 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 DPY19L1Q2PZI1 675 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 AGKQ53H12 422 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 DCAF10Q5QP82 559 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 FAM111BQ6SJ93 734 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 FUNDC1Q8IVP5 155 aa19.77■□□□□ 0.76
VPS29-206ENST00000549578 GALNT12Q8IXK2 581 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms