RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 SYT14P1Q58G82 188 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 ZNF628Q5EBL2 1059 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 PPP2R2DQ66LE6 453 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 TIGD3Q6B0B8 471 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 DPPA4Q7L190 304 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 SLC9B2Q86UD5 537 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 LAPTM4BQ86VI4 370 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 TCTE3Q8IZS6 198 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 OR7G1Q8NGA0 311 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 SLC7A13Q8TCU3 470 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 SETD7Q8WTS6 366 aaKnown RBP9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 FGF11Q92914 225 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 ZC3HAV1LQ96H79 300 aaKnown RBP9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 GON7Q9BXV9 100 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 RSPO3Q9BXY4 272 aaPredicted RBP9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 SPNS1Q9H2V7 528 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 SYNDIG1Q9H7V2 258 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 ANKRA2Q9H9E1 313 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 RANGRFQ9HD47 186 aaPredicted RBP9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 PLSCR3Q9NRY6 295 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 TVP23BQ9NYZ1 205 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 BOLA1Q9Y3E2 137 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 DOCK6Q96HP0 2047 aa9.37□□□□□ -0.91
SMARCD1-205ENST00000548573 DENND4CQ5VZ89 1909 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 A0A1W2PRQ8 180 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 TMEM129A0AVI4 362 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 PLA2G10O15496 165 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 TLX2O43763 284 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 HCN1O60741 890 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 LEFTY1O75610 366 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 TSPAN19P0C672 248 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 PRKCAP17252 672 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 MYL12AP19105 171 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 GPC1P35052 558 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ETV5P41161 510 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 KIR2DL3P43628 341 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ETV1P50549 477 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 MANFP55145 182 aaKnown RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 GNG2P59768 71 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 RPS26P62854 115 aaKnown RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 MEF2AQ02078 507 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 TSTA3Q13630 321 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 TPBGQ13641 420 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 QPRTQ15274 297 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 DUSP6Q16828 381 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 PYDC2Q56P42 97 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 LCN1P1Q5VSP4 162 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 C22orf42Q6IC83 251 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 TNFAIP8L2Q6P589 184 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 TMIGD1Q6UXZ0 262 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 DEF8Q6ZN54 512 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 BCDIN3DQ7Z5W3 292 aaKnown RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 TMC8Q8IU68 726 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 NRSN1Q8IZ57 195 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 MMP21Q8N119 569 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 CACTIN-AS1Q8N1I8 211 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 SLC39A11Q8N1S5 342 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ZNF557Q8N988 423 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 OR4D11Q8NGI4 311 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ENKURQ8TC29 256 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ZNF689Q96CS4 500 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 AP2M1Q96CW1 435 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 FYTTD1Q96QD9 318 aaKnown RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ZNF607Q96SK3 696 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 FGF20Q9NP95 211 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 SLAMF7Q9NQ25 335 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ZSCAN32Q9NX65 697 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 KLHL21Q9UJP4 597 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 A4GNTQ9UNA3 340 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 SF3B6Q9Y3B4 125 aaKnown RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 SPIN1Q9Y657 262 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 TET1Q8NFU7 2136 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 A0A0B4J293 547 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 HMGN4O00479 90 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 SLC30A4O14863 429 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 PROM1O43490 865 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 PI15O43692 258 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 NME6O75414 186 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 CLEC2LP0C7M8 214 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ACP2P11117 423 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 TNNI3P19429 210 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ERP29P30040 261 aaKnown RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 FGF9P31371 208 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 SDC2P34741 201 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 FRKP42685 505 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 GIPRP48546 466 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 GAS1P54826 345 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 PPP3R1P63098 170 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 CDK5Q00535 292 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 RAB40BQ12829 278 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 FLYWCH1Q4VC44 716 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ARSIQ5FYB1 569 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ATAT1Q5SQI0 421 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 LHX8Q68G74 356 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 METAP1DQ6UB28 335 aaPredicted RBP9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ZNF730Q6ZMV8 503 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 QSOX2Q6ZRP7 698 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 C6orf120Q7Z4R8 191 aa9.36□□□□□ -0.91
SMARCD1-205ENST00000548573 ADIPOR2Q86V24 386 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms