RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SLC22A10Q63ZE4 541 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 POMZP3Q6PJE2 187 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 ZDHHC24Q6UX98 284 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 PAMR1Q6UXH9 720 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 CAPN12Q6ZSI9 719 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 Q71RC1 249 aaPredicted RBP15.13■□□□□ 0.01
SSH1-208ENST00000548522 GPSM1Q86YR5 675 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 FBXW8Q8N3Y1 598 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 FBXO36Q8NEA4 188 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 WFDC11Q8NEX6 87 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 NEIL3Q8TAT5 605 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 SLC22A8Q8TCC7 542 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 DGAT2Q96PD7 388 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 ZIM3Q96PE6 472 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 ALPK1Q96QP1 1244 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 EFCAB11Q9BUY7 163 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 MOCS1Q9NZB8 636 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 B4GALT7Q9UBV7 327 aa15.13■□□□□ 0.01
SSH1-208ENST00000548522 BOKQ9UMX3 212 aaPredicted RBP15.13■□□□□ 0.01
SSH1-208ENST00000548522 MTO1Q9Y2Z2 717 aaKnown RBP15.13■□□□□ 0.01
SSH1-208ENST00000548522 C15orf38-AP3S2A0A0A6YYH1 394 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 WASHC1A8K0Z3 465 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 HMGB1P1B2RPK0 211 aaPredicted RBP15.12■□□□□ 0.01
SSH1-208ENST00000548522 CCNT2O60583 730 aaKnown RBP15.12■□□□□ 0.01
SSH1-208ENST00000548522 STK16O75716 305 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 TGFB1P01137 390 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 DRD2P14416 443 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 CD1DP15813 335 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 CPN2P22792 545 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 HPDP32754 393 aaPredicted RBP15.12■□□□□ 0.01
SSH1-208ENST00000548522 HSD17B3P37058 310 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 SSR2P43308 183 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 ASCL1P50553 236 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 HERVK_113P63132 956 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 ERVK-8P63133 956 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 PDIA2Q13087 525 aaKnown RBP15.12■□□□□ 0.01
SSH1-208ENST00000548522 CALCOCO2Q13137 446 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 C18orf63Q68DL7 685 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 BICRALQ6AI39 1079 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 TMEM64Q6YI46 380 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 RELL1Q8IUW5 271 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 TCAIMQ8N3R3 496 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 RNASE6Q93091 150 aaKnown RBP15.12■□□□□ 0.01
SSH1-208ENST00000548522 LRRC39Q96DD0 335 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 FBXL20Q96IG2 436 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 TBCDQ9BTW9 1192 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 TMEM109Q9BVC6 243 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 ERVK-6Q9BXR3 956 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 CAPS2Q9BXY5 557 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 PHACTR1Q9C0D0 580 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 OR51B5Q9H339 312 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 POPDC3Q9HBV1 291 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 ADAM21Q9UKJ8 722 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 CNOT11Q9UKZ1 510 aaKnown RBP15.12■□□□□ 0.01
SSH1-208ENST00000548522 ERVK-19Q9WJR5 959 aa15.12■□□□□ 0.01
SSH1-208ENST00000548522 HSPB2A8KAH6 182 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 CXorf49A8MYA2 514 aaPredicted RBP15.11■□□□□ 0.01
SSH1-208ENST00000548522 FAM47E-STBD1D6RA91 191 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 ATE1O95260 518 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 CLPSP04118 112 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 FBXO45P0C2W1 286 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 CCDC166P0CW27 439 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 PCNAP12004 261 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 COX7A2P14406 83 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 RPL21P46778 160 aaKnown RBP15.11■□□□□ 0.01
SSH1-208ENST00000548522 ZNF136P52737 540 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 ARL4CP56559 192 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 IRF8Q02556 426 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 CRYZQ08257 329 aaKnown RBP15.11■□□□□ 0.01
SSH1-208ENST00000548522 DUSP8Q13202 625 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 TRADDQ15628 312 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 HSPB2Q16082 182 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 LIX1Q8N485 282 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 PDPRQ8NCN5 879 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 GOT1L1Q8NHS2 421 aaPredicted RBP15.11■□□□□ 0.01
SSH1-208ENST00000548522 FAM222BQ8WU58 562 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 DOHHQ9BU89 302 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 TRIM31Q9BZY9 425 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 ROGDIQ9GZN7 287 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 WWTR1Q9GZV5 400 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 CNOT10Q9H9A5 744 aaKnown RBP15.11■□□□□ 0.01
SSH1-208ENST00000548522 PRM3Q9NNZ6 103 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 ACKR4Q9NPB9 350 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 CD274Q9NZQ7 290 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 PTBP2Q9UKA9 531 aaKnown RBP15.11■□□□□ 0.01
SSH1-208ENST00000548522 KIAA1549Q9HCM3 1950 aa15.11■□□□□ 0.01
SSH1-208ENST00000548522 A0A1W2PS29 197 aa15.1■□□□□ 0.01
SSH1-208ENST00000548522 GOLGA6L10A6NI86 522 aa15.1■□□□□ 0.01
SSH1-208ENST00000548522 DVL2O14641 736 aa15.1■□□□□ 0.01
SSH1-208ENST00000548522 POLR3GO15318 223 aaPredicted RBP15.1■□□□□ 0.01
SSH1-208ENST00000548522 GDF1P27539 372 aa15.1■□□□□ 0.01
SSH1-208ENST00000548522 CEACAM8P31997 349 aaPredicted RBP15.1■□□□□ 0.01
SSH1-208ENST00000548522 AGFG1P52594 562 aaKnown RBP15.1■□□□□ 0.01
SSH1-208ENST00000548522 HNRNPH2P55795 449 aaKnown RBP15.1■□□□□ 0.01
SSH1-208ENST00000548522 PLIN5Q00G26 463 aa15.1■□□□□ 0.01
SSH1-208ENST00000548522 TNFRSF17Q02223 184 aa15.1■□□□□ 0.01
SSH1-208ENST00000548522 SLAMF1Q13291 335 aa15.1■□□□□ 0.01
SSH1-208ENST00000548522 DDX39BQ13838 428 aaKnown RBP15.1■□□□□ 0.01
SSH1-208ENST00000548522 EBPQ15125 230 aaKnown RBP15.1■□□□□ 0.01
SSH1-208ENST00000548522 UAP1Q16222 522 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms