RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 ASF1BQ9NVP2 202 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 TEX10Q9NXF1 929 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-226ENST00000547259 MS4A12Q9NXJ0 267 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 CTSFQ9UBX1 484 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 ZNF282Q9UDV7 671 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-226ENST00000547259 BAIAP2L1Q9UHR4 511 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 MRPS33Q9Y291 106 aaKnown RBP11.33□□□□□ -0.6
HDAC7-226ENST00000547259 PTRH2Q9Y3E5 179 aaKnown RBP11.33□□□□□ -0.6
HDAC7-226ENST00000547259 ATG4BQ9Y4P1 393 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 ASB4Q9Y574 426 aa11.33□□□□□ -0.6
HDAC7-226ENST00000547259 A0A1W2PR48 441 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 AKAP10O43572 662 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 PRKRAO75569 313 aaKnown RBP11.32□□□□□ -0.6
HDAC7-226ENST00000547259 LRATO95237 230 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 AIFM1O95831 613 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 FHP07954 510 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 JAK1P23458 1154 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 HPCAL1P37235 193 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 NME5P56597 212 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 C2orf80Q0P641 193 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 AIMP2Q13155 320 aaKnown RBP11.32□□□□□ -0.6
HDAC7-226ENST00000547259 HEPACAMQ14CZ8 416 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 PDCD4Q53EL6 469 aaKnown RBP11.32□□□□□ -0.6
HDAC7-226ENST00000547259 NDUFAF5Q5TEU4 345 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 C18orf63Q68DL7 685 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 PIGWQ7Z7B1 504 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 ZC3H7AQ8IWR0 971 aaKnown RBP11.32□□□□□ -0.6
HDAC7-226ENST00000547259 GFM2Q969S9 779 aaKnown RBP11.32□□□□□ -0.6
HDAC7-226ENST00000547259 TBC1D20Q96BZ9 403 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 MIEF2Q96C03 454 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 TM4SF18Q96CE8 201 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 EGLN2Q96KS0 407 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 OR1F2PQ96R84 312 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 DPY30Q9C005 99 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 MIEF1Q9NQG6 463 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 SLC22A11Q9NSA0 550 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 C14orf105Q9NVL8 296 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 P4HTMQ9NXG6 502 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 KCMF1Q9P0J7 381 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 LUZP4Q9P127 313 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 HEY2Q9UBP5 337 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 ERRFI1Q9UJM3 462 aaPredicted RBP11.32□□□□□ -0.6
HDAC7-226ENST00000547259 WBP11Q9Y2W2 641 aaKnown RBP11.32□□□□□ -0.6
HDAC7-226ENST00000547259 ARL2BPQ9Y2Y0 163 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 GPR45Q9Y5Y3 372 aa11.32□□□□□ -0.6
HDAC7-226ENST00000547259 TEP1Q99973 2627 aaKnown RBP11.31□□□□□ -0.6
HDAC7-226ENST00000547259 C1orf226A1L170 272 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 FAM227AF5H4B4 570 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 PROM1O43490 865 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 B4GALT2O60909 372 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 CDC123O75794 336 aaPredicted RBP11.31□□□□□ -0.6
HDAC7-226ENST00000547259 ONECUT2O95948 504 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 ALBP02768 609 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 DRD2P14416 443 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 PCSK2P16519 638 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 IL10P22301 178 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 RPL3P39023 403 aaKnown RBP11.31□□□□□ -0.6
HDAC7-226ENST00000547259 DCTP40126 519 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 ATP4BP51164 291 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 IRX1P78414 480 aaPredicted RBP11.31□□□□□ -0.6
HDAC7-226ENST00000547259 SQLEQ14534 574 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 MINDY4Q4G0A6 757 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 PRR30Q53SZ7 412 aaPredicted RBP11.31□□□□□ -0.6
HDAC7-226ENST00000547259 VWA2Q5GFL6 755 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 METTL21CQ5VZV1 264 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 HIST2H2BCQ6DN03 193 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 OR52E8Q6IFG1 317 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 FAM71E1Q6IPT2 247 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 Q6ZS92 163 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 OVCH1Q7RTY7 1134 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 PRSS58Q8IYP2 241 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 SHISA5Q8N114 240 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 MIER2Q8N344 545 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 CCDC197Q8NCU1 140 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 ST6GALNAC3Q8NDV1 305 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 STT3BQ8TCJ2 826 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 ZBTB18Q99592 522 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 BARD1Q99728 777 aaKnown RBP11.31□□□□□ -0.6
HDAC7-226ENST00000547259 BRINP2Q9C0B6 783 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 SOX17Q9H6I2 414 aaPredicted RBP11.31□□□□□ -0.6
HDAC7-226ENST00000547259 ZNF552Q9H707 407 aaPredicted RBP11.31□□□□□ -0.6
HDAC7-226ENST00000547259 RPF2Q9H7B2 306 aaKnown RBP11.31□□□□□ -0.6
HDAC7-226ENST00000547259 NXT1Q9UKK6 140 aaKnown RBP11.31□□□□□ -0.6
HDAC7-226ENST00000547259 MAPRE3Q9UPY8 281 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 PCDHA9Q9Y5H5 950 aa11.31□□□□□ -0.6
HDAC7-226ENST00000547259 IGLV3-12A0A075B6K2 115 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 GLOD5A6NK44 160 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 CYR61O00622 381 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 CLDN4O14493 209 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 SCAMP2O15127 329 aaKnown RBP11.3□□□□□ -0.6
HDAC7-226ENST00000547259 PRMT3O60678 531 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 CCDC22O60826 627 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 JRKO75564 520 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 BMP10O95393 424 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 ZGLP1P0C6A0 271 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 COX7A2P14406 83 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 DDCP20711 480 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 PRPS1L1P21108 318 aa11.3□□□□□ -0.6
HDAC7-226ENST00000547259 HNRNPFP52597 415 aaKnown RBP11.3□□□□□ -0.6
HDAC7-226ENST00000547259 CLNS1AP54105 237 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms