RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 FOSL2P15408 326 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 PPP3CBP16298 524 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 NDUFS1P28331 727 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 S100A10P60903 97 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 AKR1C8PQ5T2L2 129 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 IFNL1Q8IU54 200 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 CFAP52Q8N1V2 620 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 OR2T11Q8NH01 316 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 ELP4Q96EB1 424 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 TEPSINQ96N21 525 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 COL2A1P02458 1487 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-212ENST00000546744 TEX13DA0A0J9YY54 714 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-212ENST00000546744 METTL15A6NJ78 407 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 ENPP3O14638 875 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 SSX5O60225 188 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 UGDHO60701 494 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 JUPP14923 745 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 NDUFV2P19404 249 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 RGS19P49795 217 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 SH3BP2P78314 561 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 LAPTM4AQ15012 233 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 ARHGAP11AQ6P4F7 1023 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 LRRC56Q8IYG6 542 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-212ENST00000546744 ARL14Q8N4G2 192 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 OR8K3Q8NH51 312 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 ELP5Q8TE02 316 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 THAP7Q9BT49 309 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-212ENST00000546744 TTPALQ9BTX7 342 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 MMP28Q9H239 520 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 GIMAP2Q9UG22 337 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 BTNL2Q9UIR0 455 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 PCTPQ9UKL6 214 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 NUDT19A8MXV4 375 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 H7C417 338 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 ZNF821O75541 412 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-212ENST00000546744 RBMS1P29558 406 aaKnown RBP12.25□□□□□ -0.45
PTCH1-212ENST00000546744 BRCC3P46736 316 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 PUM1Q14671 1186 aaKnown RBP eCLIP12.25□□□□□ -0.45
PTCH1-212ENST00000546744 IRF4Q15306 451 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 RNASE10Q5GAN6 216 aaKnown RBP12.25□□□□□ -0.45
PTCH1-212ENST00000546744 C1orf220Q5T0J3 134 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 AADACL4Q5VUY2 407 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 AGTRAPQ6RW13 159 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 SLC5A8Q8N695 610 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 ANKRD53Q8N9V6 530 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 AP1S3Q96PC3 154 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 XYLT2Q9H1B5 865 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 PRMT8Q9NR22 394 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-212ENST00000546744 B3GALT2O43825 422 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 JUNP05412 331 aaKnown RBP12.25□□□□□ -0.45
PTCH1-212ENST00000546744 CNR2P34972 360 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 SELENOWP63302 87 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 GNMTQ14749 295 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 ELP2Q6IA86 826 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 TMIGD1Q6UXZ0 262 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 SLC46A3Q7Z3Q1 461 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 CCDC71Q8IV32 467 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-212ENST00000546744 CNTN4Q8IWV2 1026 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 LILRA2Q8N149 483 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 ZNF527Q8NB42 609 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 POGLUT1Q8NBL1 392 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 OR6C4Q8NGE1 309 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 GSX2Q9BZM3 304 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 BEX1Q9HBH7 125 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 SLC27A5Q9Y2P5 690 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 ZFP37Q9Y6Q3 630 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-212ENST00000546744 TNS1Q9HBL0 1735 aaKnown RBP12.25□□□□□ -0.45
PTCH1-212ENST00000546744 SOCS5O75159 536 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 AK1P00568 194 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 PCSK6P29122 969 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 PPM1AP35813 382 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 UAP1L1Q3KQV9 507 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 BRAT1Q6PJG6 821 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 OR5T3Q8NGG3 340 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 GPR150Q8NGU9 434 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 OR56A3Q8NH54 315 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 FRS2Q8WU20 508 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 RBM18Q96H35 190 aaKnown RBP12.25□□□□□ -0.45
PTCH1-212ENST00000546744 MCHR1Q99705 422 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 EVA1AQ9H8M9 152 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 GNG8Q9UK08 70 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 GPR45Q9Y5Y3 372 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 RHPN2P1A8MT19 583 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 ARPC5O15511 151 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 SULT1C4O75897 302 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 C6orf47O95873 294 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 CLPPQ16740 277 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-212ENST00000546744 TPRG1Q6ZUI0 275 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 OR52E4Q8NGH9 312 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 CCDC120Q96HB5 630 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 ZNF558Q96NG5 402 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 ZNF300Q96RE9 604 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-212ENST00000546744 UHRF1Q96T88 793 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-212ENST00000546744 RANGRFQ9HD47 186 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-212ENST00000546744 EMCNQ9ULC0 261 aa12.25□□□□□ -0.45
PTCH1-212ENST00000546744 IQCF5A8MTL0 148 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 S100A8P05109 93 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 EFNA1P20827 205 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-212ENST00000546744 AGXTP21549 392 aa12.24□□□□□ -0.45
PTCH1-212ENST00000546744 LMO2P25791 158 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms