RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 PTGFRNQ9P2B2 879 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 VPS4AQ9UN37 437 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 ASPDHA6ND91 283 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 GLOD5A6NK44 160 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 TTC36A6NLP5 189 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 IDSB3KWA1 339 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 BRINP1O60477 761 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 PLOD3O60568 738 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 DNAJA2O60884 412 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 DNAJB6O75190 326 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 CBX6O95503 412 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 HEXBP07686 556 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 FOLR3P41439 243 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 ID4P47928 161 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 NCBP2P52298 156 aaKnown RBP eCLIP15.01□□□□□ -0.012e-16■□□□□ 8.3
PRPF40A-212ENST00000545856 VAC14Q08AM6 782 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 MPEG1Q2M385 716 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 VWA2Q5GFL6 755 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 C6orf10Q5SRN2 563 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 MLIPQ5VWP3 458 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 TMEM205Q6UW68 189 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 MMP21Q8N119 569 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 TMEM52Q8NDY8 209 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 OR8J3Q8NGG0 315 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 OR56A1Q8NGH5 318 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 SUN3Q8TAQ9 357 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 DAZLQ92904 295 aaKnown RBP15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 KIAA1143Q96AT1 154 aaPredicted RBP15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 RCN3Q96D15 328 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 DGAT2Q96PD7 388 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 CRB3Q9BUF7 120 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 ALOXE3Q9BYJ1 711 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 VN1R1Q9GZP7 353 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 GLIPR2Q9H4G4 154 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 C3orf14Q9HBI5 128 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 MKL2Q9ULH7 1088 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 MSRB2Q9Y3D2 182 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 CLDN16Q9Y5I7 305 aa15.01□□□□□ -0.01
PRPF40A-212ENST00000545856 FAM227AF5H4B4 570 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 FBP2O00757 339 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 OR10H2O60403 315 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 LDB3O75112 727 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 ALOX12BO75342 701 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 PRKRAO75569 313 aaKnown RBP15□□□□□ -0.01
PRPF40A-212ENST00000545856 KLF7O75840 302 aaPredicted RBP15□□□□□ -0.01
PRPF40A-212ENST00000545856 ANP32DO95626 131 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 KRT75O95678 551 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 C8orf89P0DMQ9 161 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 T-ENOLP0DO92 83 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 UQCRC2P22695 453 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 GPC1P35052 558 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 NUDT2P50583 147 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 ANXA11P50995 505 aaKnown RBP15□□□□□ -0.01
PRPF40A-212ENST00000545856 EMP2P54851 167 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 PSPHP78330 225 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 MAP4K2Q12851 820 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 DNASE1L3Q13609 305 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 NFYCQ13952 458 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 NSDHLQ15738 373 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 MFSD4BQ5TF39 518 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 ANKRD26P1Q6NSI1 321 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 ZCCHC12Q6PEW1 402 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 TIPARPQ7Z3E1 657 aaKnown RBP15□□□□□ -0.01
PRPF40A-212ENST00000545856 RETREG3Q86VR2 466 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 GALNT12Q8IXK2 581 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 PGAM4Q8N0Y7 254 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 POU5F2Q8N7G0 328 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 OR4A15Q8NGL6 344 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 CTHRC1Q96CG8 243 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 LRRC58Q96CX6 371 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 THUMPD1Q9NXG2 353 aaKnown RBP15□□□□□ -0.01
PRPF40A-212ENST00000545856 C5AR2Q9P296 337 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 DKK4Q9UBT3 224 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 C3orf18Q9UK00 162 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 WASF3Q9UPY6 502 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 CFL2Q9Y281 166 aa15□□□□□ -0.01
PRPF40A-212ENST00000545856 FARSAQ9Y285 508 aaKnown RBP15□□□□□ -0.01
PRPF40A-212ENST00000545856 LOC102723996A0A087X1L8 192 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 TRBV5-3A0A0A0MS03 114 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 PMS2P1A4D2B8 440 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 WASHC1A8K0Z3 465 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 AGRPO00253 132 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 TERTO14746 1132 aaKnown RBP14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 COQ9O75208 318 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 C6orf47O95873 294 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 HOXB9P17482 250 aaPredicted RBP14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 TCN2P20062 427 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 PTPN4P29074 926 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 PTPN6P29350 595 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 AP2B1P63010 937 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 HBA1P69905 142 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 FADDQ13158 208 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 TBC1D25Q3MII6 688 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 ZNF628Q5EBL2 1059 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 C8orf82Q6P1X6 216 aaPredicted RBP14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 SLC2A7Q6PXP3 512 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 DLEU7Q6UYE1 221 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 OR7G1Q8NGA0 311 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 CT55Q8WUE5 264 aa14.99□□□□□ -0.01
PRPF40A-212ENST00000545856 CIDECQ96AQ7 238 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms