RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 VWA5B2Q8N398 1253 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 ACOT4Q8N9L9 421 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 FAM45AQ8TCE6 357 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 SPPL2AQ8TCT8 520 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 TP53INP1Q96A56 240 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 F2RL3Q96RI0 385 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 WWTR1Q9GZV5 400 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 PIGMQ9H3S5 423 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.44□□□□□ -0.26
RTN3-214ENST00000545432 NDRG3Q9UGV2 375 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 C15orf41Q9Y2V0 281 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 SLC6A5Q9Y345 797 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 ROS1P08922 2347 aa13.44□□□□□ -0.26
RTN3-214ENST00000545432 OR6C76A6NM76 312 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 CDC7O00311 574 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 ERN1O75460 977 aaKnown RBP13.43□□□□□ -0.26
RTN3-214ENST00000545432 ACTL6AO96019 429 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 CLPSP04118 112 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 CD22P20273 847 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 PTMSP20962 102 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 LOXP28300 417 aaPredicted RBP13.43□□□□□ -0.26
RTN3-214ENST00000545432 GALNSP34059 522 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 NAGLUP54802 743 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 ID2Q02363 134 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 TGM3Q08188 693 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 TMEM81Q6P7N7 255 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 FAM13CQ8NE31 585 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 CCT6BQ92526 530 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 MED12Q93074 2177 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 WNT2BQ93097 391 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 ABTB1Q969K4 478 aaPredicted RBP13.43□□□□□ -0.26
RTN3-214ENST00000545432 RBM18Q96H35 190 aaKnown RBP13.43□□□□□ -0.26
RTN3-214ENST00000545432 TMEM41AQ96HV5 264 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 JSRP1Q96MG2 331 aaPredicted RBP13.43□□□□□ -0.26
RTN3-214ENST00000545432 COPS7BQ9H9Q2 264 aaPredicted RBP13.43□□□□□ -0.26
RTN3-214ENST00000545432 WWOXQ9NZC7 414 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 CAMK2AQ9UQM7 478 aa13.43□□□□□ -0.26
RTN3-214ENST00000545432 TP53I11O14683 189 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 WDR47O94967 919 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 SOX30O94993 753 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 CNOT4O95628 575 aaKnown RBP13.42□□□□□ -0.26
RTN3-214ENST00000545432 HIST1H1TP22492 207 aaPredicted RBP13.42□□□□□ -0.26
RTN3-214ENST00000545432 CRYGSP22914 178 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 PTPN6P29350 595 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 CASP3P42574 277 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 CASP2P42575 452 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 MSH2P43246 934 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 RPL21P46778 160 aaKnown RBP13.42□□□□□ -0.26
RTN3-214ENST00000545432 GAB1Q13480 694 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 C18orf21Q32NC0 220 aaPredicted RBP13.42□□□□□ -0.26
RTN3-214ENST00000545432 EIPR1Q53HC9 387 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 CDKL4Q5MAI5 379 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 SPANXN3Q5MJ09 141 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 TIGD3Q6B0B8 471 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 C20orf204Q6ZNR8 217 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 OR4N5Q8IXE1 308 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 ST13P4Q8IZP2 240 aaPredicted RBP13.42□□□□□ -0.26
RTN3-214ENST00000545432 NKAPQ8N5F7 415 aaKnown RBP13.42□□□□□ -0.26
RTN3-214ENST00000545432 DIO2Q92813 273 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 TANKQ92844 425 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 PPWD1Q96BP3 646 aaKnown RBP13.42□□□□□ -0.26
RTN3-214ENST00000545432 CTHRC1Q96CG8 243 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 RILPQ96NA2 401 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 GNRHR2Q96P88 292 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 DGAT2Q96PD7 388 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 TM9SF2Q99805 663 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 G6PC3Q9BUM1 346 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 MS4A8Q9BY19 250 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 ZNF701Q9NV72 531 aaPredicted RBP13.42□□□□□ -0.26
RTN3-214ENST00000545432 GUCA1BQ9UMX6 200 aa13.42□□□□□ -0.26
RTN3-214ENST00000545432 CHD3Q12873 2000 aaKnown RBP13.41□□□□□ -0.26
RTN3-214ENST00000545432 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 TAPBPO15533 448 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 DYRK3O43781 588 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 TMCC2O75069 709 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 TRAPPC6AO75865 159 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 TNFSF13O75888 250 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 PCDH1Q08174 1060 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 CBLBQ13191 982 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 DOC2AQ14183 400 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 RCAN2Q14206 197 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 RPS6KA2Q15349 733 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 TBCCQ15814 346 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 TMEM35AQ53FP2 167 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 SLC29A4Q7RTT9 530 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 LUZP2Q86TE4 346 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 PHC2Q8IXK0 858 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 TAGAPQ8N103 731 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 ZNF473Q8WTR7 871 aaKnown RBP13.41□□□□□ -0.26
RTN3-214ENST00000545432 SLC44A1Q8WWI5 657 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 PTCD3Q96EY7 689 aaKnown RBP13.41□□□□□ -0.26
RTN3-214ENST00000545432 CERS2Q96G23 380 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 WFIKKN1Q96NZ8 548 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 CCL19Q99731 98 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 TUBA1CQ9BQE3 449 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 NAT9Q9BTE0 207 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 EFCAB11Q9BUY7 163 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 ACBD3Q9H3P7 528 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 MS4A12Q9NXJ0 267 aa13.41□□□□□ -0.26
RTN3-214ENST00000545432 CLCF1Q9UBD9 225 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms