RNA–Protein interactions for RNA: ENST00000545328.6

SEC23A-203, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-203ENST00000545328 NUS1Q96E22 293 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 RNF208Q9H0X6 261 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 TMEM39AQ9NV64 488 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 MYL12BO14950 172 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 SCAMP1O15126 338 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 LILRB5O75023 590 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 SNX4O95219 450 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 RHOP08100 348 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 C6P13671 934 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 PSMA1P25786 263 aaKnown RBP16.05■□□□□ 0.16
SEC23A-203ENST00000545328 GPC1P35052 558 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 OR2G6Q5TZ20 316 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 TMPRSS11AQ6ZMR5 421 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 CCDC149Q6ZUS6 474 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 LRRC56Q8IYG6 542 aaPredicted RBP16.05■□□□□ 0.16
SEC23A-203ENST00000545328 PLA2G15Q8NCC3 412 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 PDXPQ96GD0 296 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 TMEM80Q96HE8 168 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 OR2A14Q96R47 310 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 TAPBPLQ9BX59 468 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 ZDHHC5Q9C0B5 715 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 DYRK4Q9NR20 520 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 CNOT2Q9NZN8 540 aaKnown RBP16.05■□□□□ 0.16
SEC23A-203ENST00000545328 KLHL3Q9UH77 587 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 A3GALT2U3KPV4 340 aa16.05■□□□□ 0.16
SEC23A-203ENST00000545328 SH3D21A4FU49 640 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 HEPACAM2A8MVW5 462 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 HMGN4O00479 90 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 SPINT1O43278 529 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 LATO43561 262 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 SLITRK5O94991 958 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 CSF2P04141 144 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 SCG5P05408 212 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 CSTF2P33240 577 aaKnown RBP eCLIP16.04■□□□□ 0.16
SEC23A-203ENST00000545328 RPL3P39023 403 aaKnown RBP16.04■□□□□ 0.16
SEC23A-203ENST00000545328 ERVFC1P60507 584 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 DBPQ10586 325 aaPredicted RBP16.04■□□□□ 0.16
SEC23A-203ENST00000545328 PGBD2Q6P3X8 592 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 USP30Q70CQ3 517 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 VASH1Q7L8A9 365 aaPredicted RBP16.04■□□□□ 0.16
SEC23A-203ENST00000545328 CAMKK1Q8N5S9 505 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 SYT14Q8NB59 555 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 NXPE3Q969Y0 559 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 SERHL2Q9H4I8 314 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.04■□□□□ 0.16
SEC23A-203ENST00000545328 DNMT3AQ9Y6K1 912 aaPredicted RBP16.04■□□□□ 0.16
SEC23A-203ENST00000545328 KIAA1671Q9BY89 1806 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 FRS3O43559 492 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 TMPRSS11DO60235 418 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 MOSPD3O75425 235 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 ITGB8P26012 769 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 HEPACAMQ14CZ8 416 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 ATAT1Q5SQI0 421 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 AGAP6Q5VW22 663 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 LILRA6Q6PI73 481 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 IQCHQ86VS3 1027 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 NACC2Q96BF6 587 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 TM4SF18Q96CE8 201 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 AGAP4Q96P64 663 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 ANKRA2Q9H9E1 313 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 ABCB9Q9NP78 766 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 MALT1Q9UDY8 824 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 SLC23A2Q9UGH3 650 aa16.04■□□□□ 0.16
SEC23A-203ENST00000545328 PRAMEF27A3QJZ7 478 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 UGT2B17O75795 530 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 ADAP00813 363 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 ADH1AP07327 375 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 DDCP20711 480 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 CRYBB2P43320 205 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 ST8SIA6P61647 398 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 MLLT1Q03111 559 aaPredicted RBP16.03■□□□□ 0.16
SEC23A-203ENST00000545328 RUNX1T1Q06455 604 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 MAP4K2Q12851 820 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 HNRNPA0Q13151 305 aaKnown RBP16.03■□□□□ 0.16
SEC23A-203ENST00000545328 TCEA2Q15560 299 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 ZNF750Q32MQ0 723 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 SLC39A5Q6ZMH5 540 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 C17orf64Q86WR6 236 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 PIK3R3Q92569 461 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 ARRDC3Q96B67 414 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 TREX2Q9BQ50 279 aaPredicted RBP16.03■□□□□ 0.16
SEC23A-203ENST00000545328 SLC25A19Q9HC21 320 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 CRNNQ9UBG3 495 aaPredicted RBP16.03■□□□□ 0.16
SEC23A-203ENST00000545328 SCN3AQ9NY46 2000 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 A0A1W2PQ09 198 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 IDH3BO43837 385 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 MPZL2O60487 215 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 ERAL1O75616 437 aaKnown RBP16.03■□□□□ 0.16
SEC23A-203ENST00000545328 SRPRAP08240 638 aaKnown RBP16.03■□□□□ 0.16
SEC23A-203ENST00000545328 NR2F1P10589 423 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 CD72P21854 359 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 GSTM5P46439 218 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 CCT3P49368 545 aaKnown RBP16.03■□□□□ 0.16
SEC23A-203ENST00000545328 ZNF79Q15937 498 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 ATAD3CQ5T2N8 411 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 KHDRBS2Q5VWX1 349 aaKnown RBP16.03■□□□□ 0.16
SEC23A-203ENST00000545328 PODNL1Q6PEZ8 512 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 FAM131AQ6UXB0 335 aa16.03■□□□□ 0.16
SEC23A-203ENST00000545328 APOBEC4Q8WW27 367 aaKnown RBP16.03■□□□□ 0.16
SEC23A-203ENST00000545328 LRR1Q96L50 414 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms