RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 MAGEB16A2A368 324 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 PABPN1LA6NDY0 278 aaKnown RBP8.54□□□□□ -1.04
CHD4-212ENST00000545083 SDR42E2A6NKP2 422 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 GOLGA8MH3BSY2 632 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 RTCAO00442 366 aaKnown RBP8.54□□□□□ -1.04
CHD4-212ENST00000545083 GNB5O14775 395 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 PRAMEF4O60810 478 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 CLEC3AO75596 197 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 CLPSP04118 112 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 CYP4B1P13584 511 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 CPN1P15169 458 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 PTPN6P29350 595 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 GDF5P43026 501 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 RPL21P46778 160 aaKnown RBP8.54□□□□□ -1.04
CHD4-212ENST00000545083 ATP5J2P56134 94 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 IL2P60568 153 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 HERVK_113P63132 956 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 ERVK-8P63133 956 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 RCN2Q14257 317 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 EBPQ15125 230 aaKnown RBP8.54□□□□□ -1.04
CHD4-212ENST00000545083 TOMM20Q15388 145 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 TBCELQ5QJ74 424 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 PRAMEF9Q5VWM5 478 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 ARMC3Q5W041 872 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 ZNF474Q6S9Z5 364 aaPredicted RBP8.54□□□□□ -1.04
CHD4-212ENST00000545083 C4orf22Q6V702 233 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 PLEKHM3Q6ZWE6 761 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 GSTA5Q7RTV2 222 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 ZNF550Q7Z398 422 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 DND1Q8IYX4 353 aaKnown RBP8.54□□□□□ -1.04
CHD4-212ENST00000545083 C2CD4AQ8NCU7 369 aaPredicted RBP8.54□□□□□ -1.04
CHD4-212ENST00000545083 FAM83FQ8NEG4 500 aaPredicted RBP8.54□□□□□ -1.04
CHD4-212ENST00000545083 TTLQ8NG68 377 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 SPPL2AQ8TCT8 520 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 CALML6Q8TD86 181 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 WNT2BQ93097 391 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 ZC3HAV1LQ96H79 300 aaKnown RBP8.54□□□□□ -1.04
CHD4-212ENST00000545083 FBXL20Q96IG2 436 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 DGAT2Q96PD7 388 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 TM9SF2Q99805 663 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 MED18Q9BUE0 208 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 ERVK-6Q9BXR3 956 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 ANGPTL4Q9BY76 406 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 PIGMQ9H3S5 423 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 COPS7BQ9H9Q2 264 aaPredicted RBP8.54□□□□□ -1.04
CHD4-212ENST00000545083 LYRM4Q9HD34 91 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 YAE1D1Q9NRH1 226 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 TEX10Q9NXF1 929 aaPredicted RBP8.54□□□□□ -1.04
CHD4-212ENST00000545083 ZNF226Q9NYT6 803 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 SLC17A6Q9P2U8 582 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 ERVK-19Q9WJR5 959 aa8.54□□□□□ -1.04
CHD4-212ENST00000545083 CR1P17927 2039 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 A0A1W2PNV4 684 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 H0Y3Z8 333 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 CDC7O00311 574 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 MSTNO14793 375 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 CD5LO43866 347 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 H2AFYO75367 372 aaKnown RBP8.53□□□□□ -1.04
CHD4-212ENST00000545083 IPO7O95373 1038 aaKnown RBP8.53□□□□□ -1.04
CHD4-212ENST00000545083 TGM6O95932 706 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 PLAUP00749 431 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 AHSGP02765 367 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 ENO2P09104 434 aaPredicted RBP8.53□□□□□ -1.04
CHD4-212ENST00000545083 COX7A2P14406 83 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 GNAZP19086 355 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 CASP3P42574 277 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 MAGEA3P43357 314 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 MASP1P48740 699 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 DIO3P55073 304 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 SLC37A1P57057 533 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 SRYQ05066 204 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 GPS1Q13098 491 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 RPS6KA2Q15349 733 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 TIGD3Q6B0B8 471 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 VWA1Q6PCB0 445 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 ACOT4Q8N9L9 421 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 TMEM171Q8WVE6 324 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 STARD4Q96DR4 205 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 SIGLEC10Q96LC7 697 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 ZFP3Q96NJ6 502 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 SERPINB12Q96P63 405 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 UCN2Q96RP3 112 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 FAM167BQ9BTA0 163 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 REG4Q9BYZ8 158 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 FETUBQ9UGM5 382 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 ZNF490Q9ULM2 529 aaPredicted RBP8.53□□□□□ -1.04
CHD4-212ENST00000545083 DTX4Q9Y2E6 619 aa8.53□□□□□ -1.04
CHD4-212ENST00000545083 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.52□□□□□ -1.05
CHD4-212ENST00000545083 NPEPPSL1A6NEC2 478 aa8.52□□□□□ -1.05
CHD4-212ENST00000545083 ANKDD1BA6NHY2 528 aa8.52□□□□□ -1.05
CHD4-212ENST00000545083 WASHC1A8K0Z3 465 aa8.52□□□□□ -1.05
CHD4-212ENST00000545083 HAX1O00165 279 aa8.52□□□□□ -1.05
CHD4-212ENST00000545083 TP53I11O14683 189 aa8.52□□□□□ -1.05
CHD4-212ENST00000545083 TLX2O43763 284 aaPredicted RBP8.52□□□□□ -1.05
CHD4-212ENST00000545083 SH3BGRLO75368 114 aa8.52□□□□□ -1.05
CHD4-212ENST00000545083 PRKRAO75569 313 aaKnown RBP8.52□□□□□ -1.05
CHD4-212ENST00000545083 SMNDC1O75940 238 aaKnown RBP eCLIP8.52□□□□□ -1.05
CHD4-212ENST00000545083 WDR47O94967 919 aa8.52□□□□□ -1.05
CHD4-212ENST00000545083 SNX4O95219 450 aa8.52□□□□□ -1.05
CHD4-212ENST00000545083 ACTL6AO96019 429 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms