RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 RAE1P78406 368 aaKnown RBP11.65□□□□□ -0.54
ACTN1-206ENST00000544964 PMP22Q01453 160 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 ACSM2AQ08AH3 577 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 CCNYL2Q5T2Q4 361 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 ACSM2BQ68CK6 577 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 PLAG1Q6DJT9 500 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 CYP20A1Q6UW02 462 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 GFRALQ6UXV0 394 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 PAGE2Q7Z2X7 111 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 MAVSQ7Z434 540 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 KIRREL3Q8IZU9 778 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 ZCCHC7Q8N3Z6 543 aaKnown RBP11.65□□□□□ -0.54
ACTN1-206ENST00000544964 FAM47BQ8NA70 645 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 PIWIL2Q8TC59 973 aaKnown RBP11.65□□□□□ -0.54
ACTN1-206ENST00000544964 MARVELD3Q96A59 401 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 TUBGCP3Q96CW5 907 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 THOC1Q96FV9 657 aaKnown RBP11.65□□□□□ -0.54
ACTN1-206ENST00000544964 CSF3RQ99062 836 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 NPLQ9BXD5 320 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-206ENST00000544964 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.65□□□□□ -0.54
ACTN1-206ENST00000544964 C1orf109Q9NX04 203 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 KCMF1Q9P0J7 381 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 DAPP1Q9UN19 280 aa11.65□□□□□ -0.54
ACTN1-206ENST00000544964 POLR3HQ9Y535 204 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-206ENST00000544964 GTF3C1Q12789 2109 aa11.65□□□□□ -0.55
ACTN1-206ENST00000544964 GOLGA8QA0A0J9YX86 632 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 GOLGA8OA6NCC3 632 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 PRSS44E7EML9 344 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 GOLGA8NF8WBI6 632 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 PSMD12O00232 456 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-206ENST00000544964 LSM1O15116 133 aaKnown RBP11.64□□□□□ -0.55
ACTN1-206ENST00000544964 POLR3GO15318 223 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-206ENST00000544964 HDAC3O15379 428 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 PCDH7O60245 1069 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 PRAMEF2O60811 474 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 EDF1O60869 148 aaKnown RBP11.64□□□□□ -0.55
ACTN1-206ENST00000544964 B4GALT2O60909 372 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 CDC123O75794 336 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-206ENST00000544964 UNC5CO95185 931 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 FHP07954 510 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 FAM58BPP0C7Q3 252 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 CPN2P22792 545 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 PRPH2P23942 346 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 GRNP28799 593 aaKnown RBP11.64□□□□□ -0.55
ACTN1-206ENST00000544964 TIA1P31483 386 aaKnown RBP eCLIP11.64□□□□□ -0.55
ACTN1-206ENST00000544964 HNRNPFP52597 415 aaKnown RBP11.64□□□□□ -0.55
ACTN1-206ENST00000544964 HK2P52789 917 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 AP2B1P63010 937 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 MINDY4Q4G0A6 757 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 RFTN2Q52LD8 501 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-206ENST00000544964 SPIN4Q56A73 249 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 MFSD4BQ5TF39 518 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 ABHD17BQ5VST6 288 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 C18orf63Q68DL7 685 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 MRM1Q6IN84 353 aaKnown RBP11.64□□□□□ -0.55
ACTN1-206ENST00000544964 H3F3CQ6NXT2 135 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 CPEB2Q7Z5Q1 589 aaKnown RBP11.64□□□□□ -0.55
ACTN1-206ENST00000544964 ANKRD37Q7Z713 158 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 GPR180Q86V85 440 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 BEST3Q8N1M1 668 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 TMEM52Q8NDY8 209 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 UCN3Q969E3 161 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 TBC1D20Q96BZ9 403 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 CCDC120Q96HB5 630 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 NPAS2Q99743 824 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 WDR55Q9H6Y2 383 aaPredicted RBP11.64□□□□□ -0.55
ACTN1-206ENST00000544964 CLK4Q9HAZ1 481 aaKnown RBP11.64□□□□□ -0.55
ACTN1-206ENST00000544964 PFDN4Q9NQP4 134 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 LYARQ9NX58 379 aaKnown RBP11.64□□□□□ -0.55
ACTN1-206ENST00000544964 FAM53CQ9NYF3 392 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 VTI1BQ9UEU0 232 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 ADAM29Q9UKF5 820 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 ATG4BQ9Y4P1 393 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 ASB4Q9Y574 426 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 USH1CQ9Y6N9 552 aa11.64□□□□□ -0.55
ACTN1-206ENST00000544964 GNG14A0A1W2PPG7 69 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 A0A1W2PR48 441 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 TRPC5OSA6NMA1 111 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 NPIPB8E9PQR5 432 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 SLCO1B7G3V0H7 640 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 SDHDO14521 159 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 ZNF195O14628 629 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 MAN1A2O60476 641 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 PRKRAO75569 313 aaKnown RBP11.63□□□□□ -0.55
ACTN1-206ENST00000544964 MYO1DO94832 1006 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 RASAL1O95294 804 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 VIMP08670 466 aaKnown RBP11.63□□□□□ -0.55
ACTN1-206ENST00000544964 ANXA4P09525 319 aaPredicted RBP11.63□□□□□ -0.55
ACTN1-206ENST00000544964 ICAM2P13598 275 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 CA7P43166 264 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 MAPK12P53778 367 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 BTG2P78543 158 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 KIAA0040Q15053 153 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 BTBD16Q32M84 506 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 SLC9B1Q4ZJI4 515 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 ATP6AP1LQ52LC2 224 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 C6orf136Q5SQH8 315 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 FCRLBQ6BAA4 426 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 NOXRED1Q6NXP6 359 aa11.63□□□□□ -0.55
ACTN1-206ENST00000544964 MDS2Q8NDY4 140 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms