RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 NADK2Q4G0N4 442 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 CCNYL2Q5T2Q4 361 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 PRAMEF17Q5VTA0 474 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 PRR23CQ6ZRP0 262 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 GPR155Q7Z3F1 870 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 NUDT13Q86X67 352 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 KMT5CQ86Y97 462 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 HIPK1Q86Z02 1210 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 EPHX4Q8IUS5 362 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 NAXDQ8IW45 347 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 BMPERQ8N8U9 685 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 FAM47BQ8NA70 645 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 OR5T3Q8NGG3 340 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 OR10A6Q8NH74 314 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 OR1L3Q8NH93 324 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 ZCCHC10Q8TBK6 192 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 MAGEE2Q8TD90 523 aaPredicted RBP6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 ATOH1Q92858 354 aaPredicted RBP6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 FAM162AQ96A26 154 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 ZNF501Q96CX3 271 aaPredicted RBP6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 DTNBP1Q96EV8 351 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 ZNF764Q96H86 408 aaPredicted RBP6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 VPS50Q96JG6 964 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 KCNC2Q96PR1 638 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 CSF3RQ99062 836 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 SEPHS2Q99611 448 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 RBM4BQ9BQ04 359 aaKnown RBP6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 TUBA1CQ9BQE3 449 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 RBM4Q9BWF3 364 aaKnown RBP6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 SPRTNQ9H040 489 aaPredicted RBP6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 PAIP1Q9H074 479 aaKnown RBP6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 SLC25A37Q9NYZ2 338 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 USE1Q9NZ43 259 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 IFT80Q9P2H3 777 aaPredicted RBP6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 C3orf18Q9UK00 162 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 PCDHB14Q9Y5E9 798 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 CLDN16Q9Y5I7 305 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 SLC22A7Q9Y694 548 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 DCHS1Q96JQ0 3298 aa6.61□□□□□ -1.35
HMGCS2-204ENST00000544913 ZNF860A6NHJ4 632 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 C4orf47A7E2U8 309 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 DLGAP1O14490 977 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 GNGT2O14610 69 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 EI24O14681 340 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 TPST1O60507 370 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 SRPX2O60687 465 aaPredicted RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 DPM1O60762 260 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 TBX19O60806 448 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CREG1O75629 220 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 DKK1O94907 266 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 LDOC1O95751 146 aaPredicted RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 AIFM1O95831 613 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 SLC35G6P0C7Q6 338 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ATP6V1B1P15313 513 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 NCK1P16333 377 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ALOX12P18054 663 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CDKN2CP42773 168 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 SSR2P43308 183 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 TSFMP43897 325 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 MAPK12P53778 367 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 RAD23AP54725 363 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ADARB1P78563 741 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 DUSP2Q05923 314 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 VEZF1Q14119 521 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 C16orf72Q14CZ0 275 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 GTDC1Q4AE62 458 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 DEFB134Q4QY38 66 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ZC3H12BQ5HYM0 836 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 RBM48Q5RL73 367 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 MANEAQ5SRI9 462 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 C1QTNF12Q5T7M4 302 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 C18orf63Q68DL7 685 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 RBM44Q6ZP01 1051 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 USP51Q70EK9 711 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 IKBIPQ70UQ0 350 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 R3HCC1LQ7Z5L2 792 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CLEC4FQ8N1N0 589 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 C10orf111Q8N326 155 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 NATD1Q8N6N6 113 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CAMKVQ8NCB2 501 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 RCBTB1Q8NDN9 531 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 TMEM52Q8NDY8 209 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ZNF555Q8NEP9 628 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 OR5K1Q8NHB7 308 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 ZNF420Q8TAQ5 688 aaPredicted RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 FIG4Q92562 907 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 SLC47A1Q96FL8 570 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 AHCYL2Q96HN2 611 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 PYURFQ96I23 114 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CCDC74BQ96LY2 380 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 PHF12Q96QT6 1004 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 MAPKAP1Q9BPZ7 522 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 CPPED1Q9BRF8 314 aaPredicted RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 TBCDQ9BTW9 1192 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 TRIM8Q9BZR9 551 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 GRIP2Q9C0E4 1043 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 RBM38Q9H0Z9 239 aaKnown RBP6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 IKZF5Q9H5V7 419 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 TIMMDC1Q9NPL8 285 aa6.6□□□□□ -1.35
HMGCS2-204ENST00000544913 TMEM9BQ9NQ34 198 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms