RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ENPP7Q6UWV6 458 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 OR9Q2Q8NGE9 314 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 ECHDC3Q96DC8 303 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 TCEAL4Q96EI5 215 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 TMEM19Q96HH6 336 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 SH3YL1Q96HL8 342 aaPredicted RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 ZNF300Q96RE9 604 aaPredicted RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 NMNAT1Q9HAN9 279 aaPredicted RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 ZBTB20Q9HC78 741 aaPredicted RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 POLE4Q9NR33 117 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 NDOR1Q9UHB4 597 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 PCDHGB5Q9Y5G0 923 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 SLC31A1O15431 190 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CHP2O43745 196 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 SLCO2B1O94956 709 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CDRT1O95170 752 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 HIST1H2ABP04908 130 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 ZNF8P17098 575 aaPredicted RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 GADD45AP24522 165 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 ACADLP28330 430 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 PDHA2P29803 388 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 GDI1P31150 447 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CLK3P49761 638 aaKnown RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 ARHGDIBP52566 201 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 TIAL1Q01085 375 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS50-220ENST00000544910 TRAM2Q15035 370 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 EIF4HQ15056 248 aaKnown RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 UGT8Q16880 541 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 TMEM35AQ53FP2 167 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CCSAPQ6IQ19 270 aaPredicted RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 PNCKQ6P2M8 343 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 PLEKHG7Q6ZR37 379 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 HIST3H2AQ7L7L0 130 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 JAZF1Q86VZ6 243 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 FAM86B1Q8N7N1 296 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 TCEANCQ8N8B7 351 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 DENND6BQ8NEG7 585 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 OR5AR1Q8NGP9 310 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 ZNF431Q8TF32 576 aaPredicted RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 C15orf40Q8WUR7 153 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 NUDT8Q8WV74 236 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 HIST1H2ACQ93077 130 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 EGLN2Q96KS0 407 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 TRNT1Q96Q11 434 aaKnown RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 GFM1Q96RP9 751 aaKnown RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 MCCC1Q96RQ3 725 aaPredicted RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 IFT27Q9BW83 186 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 PITHD1Q9GZP4 211 aaPredicted RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 MTG2Q9H4K7 406 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 SLA2Q9H6Q3 261 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 SYNDIG1Q9H7V2 258 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 STUB1Q9UNE7 303 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CCL26Q9Y258 94 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 ENPP4Q9Y6X5 453 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 C1orf226A1L170 272 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 IGLON5A6NGN9 336 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 BOLA2-SMG1P6H3BVE0 249 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 PLD2O14939 933 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 KIAA0513O60268 411 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 KCNK5O95279 499 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CPNE6O95741 557 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 RLN1P04808 185 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 HMGN1P05114 100 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CDK1P06493 297 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 SLC2A2P11168 524 aaPredicted RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 TACR1P25103 407 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 BMPR1AP36894 532 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 RPS21P63220 83 aaKnown RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 EIF2B5Q13144 721 aaKnown RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 KIAA1161Q6NSJ0 714 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 C8orf82Q6P1X6 216 aaPredicted RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 ZNF767PQ75MW2 155 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 RNF44Q7L0R7 432 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 SYNPOQ8N3V7 929 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 RASGEF1AQ8N9B8 481 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 TBC1D15Q8TC07 691 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 TOX2Q96NM4 488 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 PHOX2BQ99453 314 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 MVB12BQ9H7P6 319 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CPNE5Q9HCH3 593 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 GPR34Q9UPC5 381 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 MRPS33Q9Y291 106 aaKnown RBP5.51□□□□□ -1.53
VPS50-220ENST00000544910 ZSCAN5BA6NJL1 495 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 MID1O15344 667 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 SLC16A6O15403 523 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 EMC8O43402 210 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 OR7A10O76100 309 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 LCKP06239 509 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 OSMP13725 252 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 STOMP27105 288 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 MC1RQ01726 317 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 SLAMF1Q13291 335 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 ATAT1Q5SQI0 421 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 SMARCD3Q6STE5 483 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 TMEM107Q6UX40 140 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 ADGRD2Q7Z7M1 963 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 TMEM17Q86X19 198 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 CAMKVQ8NCB2 501 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 OR56A3Q8NH54 315 aa5.51□□□□□ -1.53
VPS50-220ENST00000544910 ACOT12Q8WYK0 555 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms