RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 POLR3HQ9Y535 204 aaPredicted RBP17.8■□□□□ 0.44
DDX55-211ENST00000544429 TRBV11-1A0A0K0K1C0 115 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 A8MUI8 341 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 HRKO00198 91 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 PRKNO60260 465 aaPredicted RBP17.79■□□□□ 0.44
DDX55-211ENST00000544429 CLPSP04118 112 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 SDC1P18827 310 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 DDCP20711 480 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 MLF1P58340 268 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 OCRLQ01968 901 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 DUSP2Q05923 314 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 MGAT2Q10469 447 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 MEP1AQ16819 746 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 ZNF750Q32MQ0 723 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 ABHD17BQ5VST6 288 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 FCRLBQ6BAA4 426 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 RPS19BP1Q86WX3 136 aaKnown RBP17.79■□□□□ 0.44
DDX55-211ENST00000544429 C19orf60Q96EN9 201 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 ZNF764Q96H86 408 aaPredicted RBP17.79■□□□□ 0.44
DDX55-211ENST00000544429 SENP5Q96HI0 755 aaPredicted RBP17.79■□□□□ 0.44
DDX55-211ENST00000544429 EGLN2Q96KS0 407 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 TRIM45Q9H8W5 580 aaPredicted RBP17.79■□□□□ 0.44
DDX55-211ENST00000544429 THAP1Q9NVV9 213 aa17.79■□□□□ 0.44
DDX55-211ENST00000544429 ATP6AP2A0A1C7CYW4 349 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 SKAP2O75563 359 aaPredicted RBP17.78■□□□□ 0.44
DDX55-211ENST00000544429 ATP6AP2O75787 350 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 WDPCPO95876 746 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 PORP16435 677 aaPredicted RBP17.78■□□□□ 0.44
DDX55-211ENST00000544429 TNNI3P19429 210 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 CSNK2A2P19784 350 aaPredicted RBP17.78■□□□□ 0.44
DDX55-211ENST00000544429 S1PR1P21453 382 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 TNFSF10P50591 281 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 HK2P52789 917 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 FUT7Q11130 342 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 PRSS53Q2L4Q9 553 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 PRICKLE4Q2TBC4 344 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 PLEKHN1Q494U1 663 aaPredicted RBP17.78■□□□□ 0.44
DDX55-211ENST00000544429 C6orf136Q5SQH8 315 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 TRIM42Q8IWZ5 723 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 BEST3Q8N1M1 668 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 RIT1Q92963 219 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 CTHRC1Q96CG8 243 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 PPP3R2Q96LZ3 170 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 DEFB126Q9BYW3 111 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 OR8D2Q9GZM6 311 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 MANSC1Q9H8J5 431 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 PSME2Q9UL46 239 aa17.78■□□□□ 0.44
DDX55-211ENST00000544429 UQCRHLA0A096LP55 91 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 OR10H2O60403 315 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 ZFAND5O76080 213 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 UQCRHP07919 91 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 CT62P0C5K7 136 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 TRHRP34981 398 aaPredicted RBP17.77■□□□□ 0.44
DDX55-211ENST00000544429 ALDH9A1P49189 494 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 RPL38P63173 70 aaKnown RBP17.77■□□□□ 0.44
DDX55-211ENST00000544429 RNF4P78317 190 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 MAP4K2Q12851 820 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 SMU1Q2TAY7 513 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 ATG16L1Q676U5 607 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 HSDL2Q6YN16 418 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 GOLGA6L1Q8N7Z2 621 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 SUN3Q8TAQ9 357 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 KLHL29Q96CT2 875 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 ART5Q96L15 291 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 CDCP1Q9H5V8 836 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 PFDN4Q9NQP4 134 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 SLC35C2Q9NQQ7 365 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 PNPOQ9NVS9 261 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 PLA2G3Q9NZ20 509 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 GIMAP2Q9UG22 337 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 ZNF639Q9UID6 485 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 UTS2RQ9UKP6 389 aa17.77■□□□□ 0.44
DDX55-211ENST00000544429 SHANK1Q9Y566 2161 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 DYTNA2CJ06 578 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 OR5H15A6NDH6 313 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 TBX19O60806 448 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 BCKDHAP12694 445 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 FEN1P39748 380 aaKnown RBP17.76■□□□□ 0.43
DDX55-211ENST00000544429 SLC37A1P57057 533 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 ERVK-8P63133 956 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 C2orf80Q0P641 193 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 TUBA3CQ13748 450 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 PDE7AQ13946 482 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 TLR1Q15399 786 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 GALNTL6Q49A17 601 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 ATP6AP1LQ52LC2 224 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 TUBA3EQ6PEY2 450 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 GALNT12Q8IXK2 581 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 C9orf40Q8IXQ3 194 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 LRRC34Q8IZ02 419 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 SAMD14Q8IZD0 417 aaPredicted RBP17.76■□□□□ 0.43
DDX55-211ENST00000544429 CATSPER1Q8NEC5 780 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 NUBPLQ8TB37 319 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 ZNF75CPQ92670 426 aaPredicted RBP17.76■□□□□ 0.43
DDX55-211ENST00000544429 MFRPQ9BY79 579 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 EPN3Q9H201 632 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 ASIC5Q9NY37 505 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 MAT2BQ9NZL9 334 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 MYOTQ9UBF9 498 aa17.76■□□□□ 0.43
DDX55-211ENST00000544429 COPS7AQ9UBW8 275 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms