RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 FAM219BQ5XKK7 198 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 RPUSD3Q6P087 351 aaKnown RBP16.65■□□□□ 0.26
TSFM-208ENST00000543727 PRICKLE2Q7Z3G6 844 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 LRRC34Q8IZ02 419 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 KIF2BQ8N4N8 673 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 SUN3Q8TAQ9 357 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 NUBPLQ8TB37 319 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.65■□□□□ 0.263e-6■■■■■ 51.5
TSFM-208ENST00000543727 AGR3Q8TD06 166 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 ZNF721Q8TF20 911 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 ARL8AQ96BM9 186 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 KLHL29Q96CT2 875 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 ERP27Q96DN0 273 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 SENP5Q96HI0 755 aaPredicted RBP16.65■□□□□ 0.26
TSFM-208ENST00000543727 EBPLQ9BY08 206 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 TRIM45Q9H8W5 580 aaPredicted RBP16.65■□□□□ 0.26
TSFM-208ENST00000543727 CXorf21Q9HAI6 301 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 SLAMF7Q9NQ25 335 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 THAP1Q9NVV9 213 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 TAS2R7Q9NYW3 318 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 UTS2RQ9UKP6 389 aa16.65■□□□□ 0.26
TSFM-208ENST00000543727 SLITRK5O94991 958 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 WDPCPO95876 746 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 TRHRP34981 398 aaPredicted RBP16.64■□□□□ 0.25
TSFM-208ENST00000543727 ASMTP46597 345 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 ALDH9A1P49189 494 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 BST1Q10588 318 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 MAD2L1Q13257 205 aaPredicted RBP16.64■□□□□ 0.25
TSFM-208ENST00000543727 CEBPEQ15744 281 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 FAM71E1Q6IPT2 247 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 GALNT12Q8IXK2 581 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 GPALPP1Q8IXQ4 340 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 BEST3Q8N1M1 668 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 LRRC25Q8N386 305 aaPredicted RBP16.64■□□□□ 0.25
TSFM-208ENST00000543727 ZNF781Q8N8C0 355 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 OR7G1Q8NGA0 311 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 OR2T11Q8NH01 316 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 C19orf60Q96EN9 201 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 UTP23Q9BRU9 249 aaKnown RBP16.64■□□□□ 0.25
TSFM-208ENST00000543727 CDCP1Q9H5V8 836 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 MIEF1Q9NQG6 463 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 ZNF223Q9UK11 482 aaPredicted RBP16.64■□□□□ 0.25
TSFM-208ENST00000543727 ENTPD4Q9Y227 616 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 YARS2Q9Y2Z4 477 aaKnown RBP16.64■□□□□ 0.25
TSFM-208ENST00000543727 PTGDR2Q9Y5Y4 395 aa16.64■□□□□ 0.25
TSFM-208ENST00000543727 GABRR3A8MPY1 467 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 ITM2AO43736 263 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 SLC28A2O43868 658 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 LYPLA1O75608 230 aaPredicted RBP16.63■□□□□ 0.25
TSFM-208ENST00000543727 ERAL1O75616 437 aaKnown RBP16.63■□□□□ 0.25
TSFM-208ENST00000543727 PCSK2P16519 638 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 RPL38P63173 70 aaKnown RBP16.63■□□□□ 0.25
TSFM-208ENST00000543727 RNF4P78317 190 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 TTMPQ5BVD1 217 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 CES4AQ5XG92 561 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 ZNF675Q8TD23 568 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 ZBTB9Q96C00 473 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 ZNF681Q96N22 645 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 SORT1Q99523 831 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 NPAS2Q99743 824 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 EPN3Q9H201 632 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 MANSC1Q9H8J5 431 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 SLC35C2Q9NQQ7 365 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 MYOTQ9UBF9 498 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 HEY2Q9UBP5 337 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 POLR3HQ9Y535 204 aaPredicted RBP16.63■□□□□ 0.25
TSFM-208ENST00000543727 PCDHGA10Q9Y5H3 936 aa16.63■□□□□ 0.25
TSFM-208ENST00000543727 SLCO1B7G3V0H7 640 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 TBX19O60806 448 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 SNNO75324 88 aaPredicted RBP16.62■□□□□ 0.25
TSFM-208ENST00000543727 VPS4BO75351 444 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 MPIP34949 423 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 RPL3P39023 403 aaKnown RBP16.62■□□□□ 0.25
TSFM-208ENST00000543727 HK2P52789 917 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 ERVK-8P63133 956 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 C2orf80Q0P641 193 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 FUT7Q11130 342 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 MAP4K2Q12851 820 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 MPEG1Q2M385 716 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 PLEKHN1Q494U1 663 aaPredicted RBP16.62■□□□□ 0.25
TSFM-208ENST00000543727 GALNTL6Q49A17 601 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 RFTN2Q52LD8 501 aaPredicted RBP16.62■□□□□ 0.25
TSFM-208ENST00000543727 FCRLBQ6BAA4 426 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 RNF111Q6ZNA4 994 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 SLC29A4Q7RTT9 530 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 DND1Q8IYX4 353 aaKnown RBP16.62■□□□□ 0.25
TSFM-208ENST00000543727 VWA5B2Q8N398 1253 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 Q8NA96 180 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 MGARPQ8TDB4 240 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 PPWD1Q96BP3 646 aaKnown RBP16.62■□□□□ 0.25
TSFM-208ENST00000543727 MTERF3Q96E29 417 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 CNRIP1Q96F85 164 aaPredicted RBP16.62■□□□□ 0.25
TSFM-208ENST00000543727 CNPPD1Q9BV87 410 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 MFRPQ9BY79 579 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 C20orf27Q9GZN8 174 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.62■□□□□ 0.25
TSFM-208ENST00000543727 MAPRE3Q9UPY8 281 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 ERVK-19Q9WJR5 959 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 CFL2Q9Y281 166 aa16.62■□□□□ 0.25
TSFM-208ENST00000543727 TTLL8A6PVC2 850 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms