RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 RAP1GDS1P52306 607 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 HERVK_113P63132 956 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 ERVK-8P63133 956 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 MGAT2Q10469 447 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 PMPCAQ10713 525 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 TRAF3Q13114 568 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 ZNF267Q14586 743 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 UAP1Q16222 522 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 SLC22A10Q63ZE4 541 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 TMEM211Q6ICI0 200 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 C8orf74Q6P047 294 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 RPS27LQ71UM5 84 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 SLC22A16Q86VW1 577 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 MYLK4Q86YV6 388 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 CCDC71Q8IV32 467 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 FAM109AQ8N4B1 249 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 SLC15A4Q8N697 577 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 ZNF615Q8N8J6 731 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 CA5BP1Q8WTZ4 195 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 DCAKDQ8WVC6 231 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 RIT1Q92963 219 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 PHF21BQ96EK2 531 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 ERVK-6Q9BXR3 956 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 TEX10Q9NXF1 929 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 CES1P1Q9UKY3 287 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 CNOT11Q9UKZ1 510 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 ERVK-19Q9WJR5 959 aa10.88□□□□□ -0.67
CLSTN3-211ENST00000541667 INTS1Q8N201 2190 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 FREM3P0C091 2139 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 NKX2-6A6NCS4 301 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 OR14I1A6ND48 311 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 LRRC3CA6NJW4 275 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 AQP7O14520 342 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 SUSD5O60279 629 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 URI1O94763 535 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 ACSL3O95573 720 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 RBP1P09455 135 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 GLI4P10075 376 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 COX7A2P14406 83 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 TLX1P31314 330 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 PLGLB1Q02325 96 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 CKAP4Q07065 602 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 FUT7Q11130 342 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 SLC10A1Q14973 349 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 EBPQ15125 230 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 NTRK2Q16620 822 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 WHAMMP3Q1A5X7 153 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 FRG2Q64ET8 278 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 PAOXQ6QHF9 649 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 GK5Q6ZS86 529 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 FAM47EQ6ZV65 393 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 LIX1LQ8IVB5 337 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 EID3Q8N140 333 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 LRRC25Q8N386 305 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 METTL4Q8N3J2 472 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 OR10G3Q8NGC4 313 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 OR5M9Q8NGP3 310 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 RND1Q92730 232 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 ADIPOR1Q96A54 375 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 REPS1Q96D71 796 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 SPACA9Q96E40 222 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 FRG2BQ96QU4 278 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 PAFAH2Q99487 392 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 SERPINI1Q99574 410 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 TTYH2Q9BSA4 534 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 CNPPD1Q9BV87 410 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 C1QTNF3Q9BXJ4 246 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 WWTR1Q9GZV5 400 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 CXorf21Q9HAI6 301 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 FARSBQ9NSD9 589 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 LYARQ9NX58 379 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 SPRR3Q9UBC9 169 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 XPR1Q9UBH6 696 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 COPS7AQ9UBW8 275 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 CCDC168Q8NDH2 2452 aa10.87□□□□□ -0.67
CLSTN3-211ENST00000541667 IQANK1A0A1B0GTG1 560 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 ATP6AP2A0A1C7CYW4 349 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 TRIM3O75382 744 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 ATP6AP2O75787 350 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 SEMA3DO95025 777 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 P04436 131 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 KLK1P06870 262 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 RPS17P08708 135 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 NR2F6P10588 404 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 COL6A2P12110 1019 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 ACVR2AP27037 513 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 SSTR2P30874 369 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 CHRNB4P30926 498 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 SSTR4P31391 388 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 PHBP35232 272 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 ADH7P40394 386 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 BUD31P41223 144 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 PLIN5Q00G26 463 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 GALNT1Q10472 559 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 TBL3Q12788 808 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 TESK1Q15569 626 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 GGTA1PQ4G0N0 100 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 FNDC7Q5VTL7 733 aa10.86□□□□□ -0.67
CLSTN3-211ENST00000541667 KLC3Q6P597 504 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms