RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 PLD2O14939 933 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 UGT2B17O75795 530 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 IFNA14P01570 189 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 TCEA1P23193 301 aaKnown RBP9.03□□□□□ -0.96
CNOT4-212ENST00000541284 SPHARQ15513 63 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 ATAD3CQ5T2N8 411 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 TMIGD1Q6UXZ0 262 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 CD300LDQ6UXZ3 194 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 CCDC149Q6ZUS6 474 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 KIF18BQ86Y91 864 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 IQCF1Q8N6M8 205 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 OR5AR1Q8NGP9 310 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 OR5P2Q8WZ92 322 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 RNF170Q96K19 258 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 MSLNLQ96KJ4 702 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 ZNF354BQ96LW1 612 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 FOPNLQ96NB1 174 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 YIPF2Q9BWQ6 316 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 NEK6Q9HC98 313 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 CCDC177Q9NQR7 707 aaPredicted RBP9.03□□□□□ -0.96
CNOT4-212ENST00000541284 TDP1Q9NUW8 608 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 SPATA7Q9P0W8 599 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 MGAT4BQ9UQ53 548 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 ATP11BQ9Y2G3 1177 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 N6AMT1Q9Y5N5 214 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 IQCMA0A1B0GVH7 501 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 ANHXE9PGG2 379 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 CYP17A1P05093 508 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 ETV5P41161 510 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 ETV1P50549 477 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 FOXD4Q12950 439 aaPredicted RBP9.03□□□□□ -0.96
CNOT4-212ENST00000541284 TCEAL5Q5H9L2 206 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 PRAMEF14Q5SWL7 426 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 PRAMEF13Q5VWM6 474 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 GALNT6Q8NCL4 622 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 OR2L2Q8NH16 312 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 SETD7Q8WTS6 366 aaKnown RBP9.03□□□□□ -0.96
CNOT4-212ENST00000541284 TM9SF4Q92544 642 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 ZNF764Q96H86 408 aaPredicted RBP9.03□□□□□ -0.96
CNOT4-212ENST00000541284 TMEM80Q96HE8 168 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 LRIG1Q96JA1 1093 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 F2RL3Q96RI0 385 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 TWSG1Q9GZX9 223 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 WASH6PQ9NQA3 447 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 SLC23A2Q9UGH3 650 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 C17orf113A0A1B0GUU1 675 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 FAAHO00519 579 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 ASNA1O43681 348 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 CLEC2LP0C7M8 214 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 POU1F1P28069 291 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 ALDH6A1Q02252 535 aaKnown RBP9.03□□□□□ -0.96
CNOT4-212ENST00000541284 LARS2Q15031 903 aaKnown RBP9.03□□□□□ -0.96
CNOT4-212ENST00000541284 ARHGEF6Q15052 776 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 SYPL1Q16563 259 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 KHDRBS2Q5VWX1 349 aaKnown RBP9.03□□□□□ -0.96
CNOT4-212ENST00000541284 ACSM5Q6NUN0 579 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 GDPGP1Q6ZNW5 385 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 ZNF765Q7L2R6 523 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 C6orf120Q7Z4R8 191 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 ZER1Q7Z7L7 766 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 MRGPREQ86SM8 312 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 FAM26EQ8N5C1 309 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 C2orf73Q8N5S3 287 aaPredicted RBP9.03□□□□□ -0.96
CNOT4-212ENST00000541284 FLCNQ8NFG4 579 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 PROKR2Q8NFJ6 384 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 OR52I1Q8NGK6 324 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 SETD6Q8TBK2 473 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 KLHL6Q8WZ60 621 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 NXPE3Q969Y0 559 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 FAM131CQ96AQ9 280 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 TSSK6Q9BXA6 273 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 DPEP2Q9H4A9 486 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 IL23AQ9NPF7 189 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 ZSCAN32Q9NX65 697 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 TEX10Q9NXF1 929 aaPredicted RBP9.03□□□□□ -0.96
CNOT4-212ENST00000541284 ENOPH1Q9UHY7 261 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 STUB1Q9UNE7 303 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 PCDHGB2Q9Y5G2 931 aa9.03□□□□□ -0.96
CNOT4-212ENST00000541284 PRUNE2Q8WUY3 3088 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 WASHC1A8K0Z3 465 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 C4orf51C9J302 202 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 RFXAPO00287 272 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 PPM1DO15297 605 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 MMP11P24347 488 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 SSTR4P31391 388 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 RECQLP46063 649 aaPredicted RBP9.02□□□□□ -0.96
CNOT4-212ENST00000541284 CDK5Q00535 292 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 DPTQ07507 201 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 MLLT11Q13015 90 aaPredicted RBP9.02□□□□□ -0.96
CNOT4-212ENST00000541284 TIMM50Q3ZCQ8 353 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 SYT14P1Q58G82 188 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 SPANXN2Q5MJ10 180 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 WASH2PQ6VEQ5 465 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 TBC1D19Q8N5T2 526 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 SLC25A46Q96AG3 418 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 MRPS18AQ9NVS2 196 aaKnown RBP9.02□□□□□ -0.96
CNOT4-212ENST00000541284 SEC14L4Q9UDX3 406 aa9.02□□□□□ -0.96
CNOT4-212ENST00000541284 YARS2Q9Y2Z4 477 aaKnown RBP9.02□□□□□ -0.96
CNOT4-212ENST00000541284 HEATR5BQ9P2D3 2071 aa9.02□□□□□ -0.97
CNOT4-212ENST00000541284 HIDE1A8MVS5 230 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms