RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 RNF4P78317 190 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 HMGCS1Q01581 520 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 OC90Q02509 493 aaPredicted RBP12.17□□□□□ -0.46
LTBR-208ENST00000541005 ACSM2AQ08AH3 577 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 NR6A1Q15406 480 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 ACSM2BQ68CK6 577 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 SPINK14Q6IE38 97 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 LRIG3Q6UXM1 1119 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 TMEM178AQ8NBL3 297 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 OR4K14Q8NGD5 310 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 OR5L2Q8NGL0 311 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 OR6Y1Q8NGX8 325 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 DNAJB8Q8NHS0 232 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 FAM76AQ8TAV0 307 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 NR4A3Q92570 626 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 RIT1Q92963 219 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 PGM2Q96G03 612 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 APIPQ96GX9 242 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 ZIM3Q96PE6 472 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 MECRQ9BV79 373 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 FAIM2Q9BWQ8 316 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 CXorf21Q9HAI6 301 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 OLAHQ9NV23 265 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.17□□□□□ -0.46
LTBR-208ENST00000541005 ANKRD10Q9NXR5 420 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 MAP10Q9P2G4 905 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 CCL27Q9Y4X3 112 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 ACTL7BQ9Y614 415 aa12.17□□□□□ -0.46
LTBR-208ENST00000541005 NCKAP5O14513 1909 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 A0A1W2PS29 197 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 OR6C76A6NM76 312 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 AZIN1O14977 448 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 ERLIN1O75477 346 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 CRCPO75575 148 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 OR2J2O76002 312 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 CRYABP02511 175 aaKnown RBP12.16□□□□□ -0.46
LTBR-208ENST00000541005 CLPSP04118 112 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 ATP1B1P05026 303 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 SP1P08047 785 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 FGF4P08620 206 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 DRD2P14416 443 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 SSR4P51571 173 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 ERVK-8P63133 956 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 MRPL49Q13405 166 aaKnown RBP12.16□□□□□ -0.46
LTBR-208ENST00000541005 MPEG1Q2M385 716 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 CEP85LQ5SZL2 805 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 KANK2Q63ZY3 851 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 SLC25A25Q6KCM7 469 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 C9orf40Q8IXQ3 194 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 MMP21Q8N119 569 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 THAP3Q8WTV1 239 aaPredicted RBP12.16□□□□□ -0.46
LTBR-208ENST00000541005 PPWD1Q96BP3 646 aaKnown RBP12.16□□□□□ -0.46
LTBR-208ENST00000541005 RASL10BQ96S79 203 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 HES7Q9BYE0 225 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 SHCBP1LQ9BZQ2 653 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 RRAGDQ9NQL2 400 aaPredicted RBP12.16□□□□□ -0.46
LTBR-208ENST00000541005 EHD3Q9NZN3 535 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 ERVK-19Q9WJR5 959 aa12.16□□□□□ -0.46
LTBR-208ENST00000541005 ANKUB1A6NFN9 424 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 GOLGA6L10A6NI86 522 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 HRKO00198 91 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 TM9SF1O15321 606 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 CHRNGP07510 517 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 BPGMP07738 259 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 DHRS4L1P0CG22 281 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 NEFHP12036 1026 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 PORP16435 677 aaPredicted RBP12.15□□□□□ -0.46
LTBR-208ENST00000541005 CSNK2A2P19784 350 aaPredicted RBP12.15□□□□□ -0.46
LTBR-208ENST00000541005 SERPINB3P29508 390 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 SERPINB4P48594 390 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 XKP51811 444 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 SLC37A1P57057 533 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 SRSF1Q07955 248 aaKnown RBP eCLIP12.15□□□□□ -0.46
LTBR-208ENST00000541005 ZNF763Q0D2J5 394 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 FUT7Q11130 342 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 ARL13AQ5H913 290 aaPredicted RBP12.15□□□□□ -0.46
LTBR-208ENST00000541005 BEND6Q5SZJ8 279 aaPredicted RBP12.15□□□□□ -0.46
LTBR-208ENST00000541005 CLEC6AQ6EIG7 209 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 SCIMPQ6UWF3 145 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 RNF111Q6ZNA4 994 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 EXOC3L1Q86VI1 746 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 GALNT12Q8IXK2 581 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 CYP4Z2PQ8N1L4 340 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 TMEM156Q8N614 296 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.15□□□□□ -0.46
LTBR-208ENST00000541005 SREK1Q8WXA9 508 aaKnown RBP12.15□□□□□ -0.46
LTBR-208ENST00000541005 KLHL29Q96CT2 875 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 FCRL1Q96LA6 429 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 ZNF681Q96N22 645 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 FRMD6Q96NE9 622 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 CNPPD1Q9BV87 410 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 EML4Q9HC35 981 aaKnown RBP12.15□□□□□ -0.46
LTBR-208ENST00000541005 HEY2Q9UBP5 337 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 PSME2Q9UL46 239 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 DLGAP4Q9Y2H0 992 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 WBP11Q9Y2W2 641 aaKnown RBP12.15□□□□□ -0.46
LTBR-208ENST00000541005 KLF13Q9Y2Y9 288 aaPredicted RBP12.15□□□□□ -0.46
LTBR-208ENST00000541005 HECTD1Q9ULT8 2610 aa12.15□□□□□ -0.46
LTBR-208ENST00000541005 NCOA6Q14686 2063 aaPredicted RBP12.14□□□□□ -0.47
LTBR-208ENST00000541005 GNG14A0A1W2PPG7 69 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms