RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 CREB3L4Q8TEY5 395 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZFPM2Q8WW38 1151 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 MRPS31Q92665 395 aaKnown RBP9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 REPS1Q96D71 796 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 IGSF21Q96ID5 467 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 SNX18Q96RF0 628 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 MAPKAP1Q9BPZ7 522 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 TMED9Q9BVK6 235 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 SCN3AQ9NY46 2000 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 COQ3Q9NZJ6 369 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 SSR3Q9UNL2 185 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 INSL5Q9Y5Q6 135 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 HCFC2Q9Y5Z7 792 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 A0A075B6Q4 140 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 HYAL3O43820 417 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 UGT2B17O75795 530 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 ABLIM3O94929 683 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 CATP04040 527 aaKnown RBP9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 TP53P04637 393 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 OSMP13725 252 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 ITGA2P17301 1181 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 HOXB6P17509 224 aaKnown RBP9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 AVPR1BP47901 424 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 FABP5Q01469 135 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 TATDN3Q17R31 274 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 CRB2Q5IJ48 1285 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 DCST1Q5T197 706 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLX4IPQ5VYV7 408 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 FAM71E1Q6IPT2 247 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 RFPL4BQ6ZWI9 263 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 TRMT11Q7Z4G4 463 aaKnown RBP9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 SIX5Q8N196 739 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 GHDCQ8N2G8 530 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 OXR1Q8N573 874 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 NANOGP1Q8N7R0 232 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 XAGE5Q8WWM1 108 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC9A6Q92581 669 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 TMEM169Q96HH4 297 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 GDF15Q99988 308 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 KATNB1Q9BVA0 655 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 BHLHE41Q9C0J9 482 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 OR2AG1Q9H205 316 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 TBC1D17Q9HA65 648 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 GALNT9Q9HCQ5 603 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 NDUFB11Q9NX14 153 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 TMCC3Q9ULS5 477 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 NTNG1Q9Y2I2 539 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 PCDHGB2Q9Y5G2 931 aa9.83□□□□□ -0.84
CDC42SE1-207ENST00000540998 CHD9Q3L8U1 2897 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 DPM1O60762 260 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 MMP11P24347 488 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 CTBP2P56545 445 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 FCHO2Q0JRZ9 810 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 TMEM115Q12893 351 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 ELAVL2Q12926 359 aaKnown RBP9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 SP140Q13342 867 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 GINS1Q14691 196 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 HEPACAMQ14CZ8 416 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 SYT14P1Q58G82 188 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 RNASE12Q5GAN4 147 aaKnown RBP9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 PODNL1Q6PEZ8 512 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 GDPD4Q6W3E5 623 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 FLCNQ8NFG4 579 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 OR56A3Q8NH54 315 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 C9orf43Q8TAL5 461 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 C2orf15Q8WU43 125 aaKnown RBP9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 APOBEC4Q8WW27 367 aaKnown RBP9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 JPH3Q8WXH2 748 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 SNAPC3Q92966 411 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 SLC25A46Q96AG3 418 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 OTULINQ96BN8 352 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 ARMC5Q96C12 935 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZBED6CLQ96FA7 236 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 CNOT2Q9NZN8 540 aaKnown RBP9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 CNIH4Q9P003 139 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 ATP6V1HQ9UI12 483 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 CORO2BQ9UQ03 480 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 ANGPT4Q9Y264 503 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 ALG5Q9Y673 324 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 DSPPQ9NZW4 1301 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 HMX3A6NHT5 357 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 SERPIND1P05546 499 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 EPHX1P07099 455 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 PPIBP23284 216 aaKnown RBP9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 MANFP55145 182 aaKnown RBP9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 SCN1BQ07699 218 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 MESP2Q0VG99 397 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 CEP78Q5JTW2 689 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 CDKL4Q5MAI5 379 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 REEP3Q6NUK4 255 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 ZER1Q7Z7L7 766 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 OR4F15Q8NGB8 312 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 OR4M1Q8NGD0 313 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 ENKURQ8TC29 256 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 UPRTQ96BW1 309 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 C3orf14Q9HBI5 128 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 CUEDC1Q9NWM3 386 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 TRAPPC4Q9Y296 219 aa9.82□□□□□ -0.84
CDC42SE1-207ENST00000540998 HEATR5BQ9P2D3 2071 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms