RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 CIARTQ8N365 385 aaPredicted RBP6.69□□□□□ -1.34
YBX3-209ENST00000540747 NKAPQ8N5F7 415 aaKnown RBP6.69□□□□□ -1.34
YBX3-209ENST00000540747 ACOT4Q8N9L9 421 aa6.69□□□□□ -1.34
YBX3-209ENST00000540747 BBOF1Q8ND07 529 aa6.69□□□□□ -1.34
YBX3-209ENST00000540747 GABPB2Q8TAK5 448 aaPredicted RBP6.69□□□□□ -1.34
YBX3-209ENST00000540747 LINC01560Q8TB33 94 aa6.69□□□□□ -1.34
YBX3-209ENST00000540747 SLC22A8Q8TCC7 542 aa6.69□□□□□ -1.34
YBX3-209ENST00000540747 ZNF473Q8WTR7 871 aaKnown RBP6.69□□□□□ -1.34
YBX3-209ENST00000540747 SMPDL3BQ92485 455 aa6.69□□□□□ -1.34
YBX3-209ENST00000540747 WDYHV1Q96HA8 205 aa6.69□□□□□ -1.34
YBX3-209ENST00000540747 MS4A14Q96JA4 679 aa6.69□□□□□ -1.34
YBX3-209ENST00000540747 KCNC2Q96PR1 638 aa6.69□□□□□ -1.34
YBX3-209ENST00000540747 TBCDQ9BTW9 1192 aa6.69□□□□□ -1.34
YBX3-209ENST00000540747 FUT8Q9BYC5 575 aa6.69□□□□□ -1.34
YBX3-209ENST00000540747 ANKZF1Q9H8Y5 726 aa6.69□□□□□ -1.34
YBX3-209ENST00000540747 NEUROD4Q9HD90 331 aa6.69□□□□□ -1.34
YBX3-209ENST00000540747 ALKBH4Q9NXW9 302 aa6.69□□□□□ -1.34
YBX3-209ENST00000540747 COPS7AQ9UBW8 275 aa6.69□□□□□ -1.34
YBX3-209ENST00000540747 RTTNQ86VV8 2226 aa6.69□□□□□ -1.34
YBX3-209ENST00000540747 ANKDD1BA6NHY2 528 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 RTCAO00442 366 aaKnown RBP6.68□□□□□ -1.34
YBX3-209ENST00000540747 TP73O15350 636 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 SIAH2O43255 324 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 LRATO95237 230 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 CTSSP25774 331 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 ADSLP30566 484 aaPredicted RBP6.68□□□□□ -1.34
YBX3-209ENST00000540747 OPRM1P35372 400 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 SLC37A1P57057 533 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 NKX6-1P78426 367 aaPredicted RBP6.68□□□□□ -1.34
YBX3-209ENST00000540747 CBLBQ13191 982 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 PCBP2Q15366 365 aaKnown RBP eCLIP6.68□□□□□ -1.34
YBX3-209ENST00000540747 TGFBIQ15582 683 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 TMEM35AQ53FP2 167 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 TBCELQ5QJ74 424 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 BEND6Q5SZJ8 279 aaPredicted RBP6.68□□□□□ -1.34
YBX3-209ENST00000540747 BICRALQ6AI39 1079 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 WDR93Q6P2C0 686 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 OR4N5Q8IXE1 308 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 LAS2Q8IYD9 372 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 LRRC75A-AS1Q8N1F1 130 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 GOLGA6L1Q8N7Z2 621 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 C9orf106Q8NAJ2 232 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 C7orf57Q8NEG2 295 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 CCT6BQ92526 530 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 HSPBAP1Q96EW2 488 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 PTCD3Q96EY7 689 aaKnown RBP6.68□□□□□ -1.34
YBX3-209ENST00000540747 LRRC46Q96FV0 321 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 ZNF597Q96LX8 424 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 RUNDC3BQ96NL0 473 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 DACH2Q96NX9 599 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 SECISBP2Q96T21 854 aaKnown RBP6.68□□□□□ -1.34
YBX3-209ENST00000540747 PIP5K1AQ99755 562 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 EGFL8Q99944 293 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 EFCAB11Q9BUY7 163 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 CAPS2Q9BXY5 557 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 ZNF717Q9BY31 904 aaPredicted RBP6.68□□□□□ -1.34
YBX3-209ENST00000540747 UGT2B28Q9BY64 529 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 ANGPTL4Q9BY76 406 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 ROGDIQ9GZN7 287 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 DERL2Q9GZP9 239 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 WWTR1Q9GZV5 400 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 EXO5Q9H790 373 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 COPS7BQ9H9Q2 264 aaPredicted RBP6.68□□□□□ -1.34
YBX3-209ENST00000540747 CALHM2Q9HA72 323 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 POPDC3Q9HBV1 291 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 DNAJC11Q9NVH1 559 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 MOCS1Q9NZB8 636 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 CTNNAL1Q9UBT7 734 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 FETUBQ9UGM5 382 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 PTBP2Q9UKA9 531 aaKnown RBP6.68□□□□□ -1.34
YBX3-209ENST00000540747 C15orf41Q9Y2V0 281 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 JRKLQ9Y4A0 524 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 TEX264Q9Y6I9 313 aa6.68□□□□□ -1.34
YBX3-209ENST00000540747 C15orf38-AP3S2A0A0A6YYH1 394 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 FAM95CA0A1B0GW59 222 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 OR6C76A6NM76 312 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 FAM171A2A8MVW0 826 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 PGRMC1O00264 195 aaKnown RBP6.67□□□□□ -1.34
YBX3-209ENST00000540747 SASH3O75995 380 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 IL2RAP01589 272 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 COX7A2P14406 83 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 ALOX15P16050 662 aaPredicted RBP6.67□□□□□ -1.34
YBX3-209ENST00000540747 TCP1P17987 556 aaKnown RBP6.67□□□□□ -1.34
YBX3-209ENST00000540747 BMP7P18075 431 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 TNNI3P19429 210 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 GDF1P27539 372 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 SERPINB3P29508 390 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 GALNSP34059 522 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 ELK3P41970 407 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 SLCO1A2P46721 670 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 PCYT1AP49585 367 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 HNRNPH2P55795 449 aaKnown RBP6.67□□□□□ -1.34
YBX3-209ENST00000540747 PLIN5Q00G26 463 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 TNFRSF17Q02223 184 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 TGM3Q08188 693 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 FOXF2Q12947 444 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 BIKQ13323 160 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 RPS6KA2Q15349 733 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 PDK4Q16654 411 aa6.67□□□□□ -1.34
YBX3-209ENST00000540747 Q5PR19 223 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms