RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 CXXC4Q9H2H0 198 aa17.72■□□□□ 0.43
SOD2-212ENST00000540491 DDX31Q9H8H2 851 aaKnown RBP17.72■□□□□ 0.43
SOD2-212ENST00000540491 SEMA4BQ9NPR2 832 aaPredicted RBP17.72■□□□□ 0.43
SOD2-212ENST00000540491 DMRT3Q9NQL9 472 aa17.72■□□□□ 0.43
SOD2-212ENST00000540491 DNAJB12Q9NXW2 375 aaKnown RBP17.72■□□□□ 0.43
SOD2-212ENST00000540491 ALKBH4Q9NXW9 302 aa17.72■□□□□ 0.43
SOD2-212ENST00000540491 ACOT9Q9Y305 439 aa17.72■□□□□ 0.43
SOD2-212ENST00000540491 CHCHD2Q9Y6H1 151 aaPredicted RBP17.72■□□□□ 0.43
SOD2-212ENST00000540491 PLPP1O14494 284 aa17.71■□□□□ 0.43
SOD2-212ENST00000540491 DVL2O14641 736 aa17.71■□□□□ 0.43
SOD2-212ENST00000540491 SNX4O95219 450 aa17.71■□□□□ 0.43
SOD2-212ENST00000540491 C1QAP02745 245 aa17.71■□□□□ 0.43
SOD2-212ENST00000540491 SLC35E2P0CK97 266 aa17.71■□□□□ 0.43
SOD2-212ENST00000540491 ADH7P40394 386 aa17.71■□□□□ 0.43
SOD2-212ENST00000540491 KIR2DL3P43628 341 aa17.71■□□□□ 0.43
SOD2-212ENST00000540491 PIK3CGP48736 1102 aa17.71■□□□□ 0.43
SOD2-212ENST00000540491 TMED10P49755 219 aaKnown RBP17.71■□□□□ 0.43
SOD2-212ENST00000540491 SLC37A1P57057 533 aa17.71■□□□□ 0.43
SOD2-212ENST00000540491 RPP38P78345 283 aaKnown RBP17.71■□□□□ 0.43
SOD2-212ENST00000540491 C10orf62Q5T681 223 aaPredicted RBP17.71■□□□□ 0.43
SOD2-212ENST00000540491 TMEM198Q66K66 360 aa17.71■□□□□ 0.43
SOD2-212ENST00000540491 MRM1Q6IN84 353 aaKnown RBP17.71■□□□□ 0.43
SOD2-212ENST00000540491 WDR53Q7Z5U6 358 aaPredicted RBP17.71■□□□□ 0.43
SOD2-212ENST00000540491 ULK2Q8IYT8 1036 aa17.71■□□□□ 0.43
SOD2-212ENST00000540491 FAM13CQ8NE31 585 aa17.71■□□□□ 0.43
SOD2-212ENST00000540491 PPWD1Q96BP3 646 aaKnown RBP17.71■□□□□ 0.43
SOD2-212ENST00000540491 CNPPD1Q9BV87 410 aa17.71■□□□□ 0.43
SOD2-212ENST00000540491 WWTR1Q9GZV5 400 aa17.71■□□□□ 0.43
SOD2-212ENST00000540491 SNX15Q9NRS6 342 aa17.71■□□□□ 0.43
SOD2-212ENST00000540491 ZNF629Q9UEG4 869 aaPredicted RBP17.71■□□□□ 0.43
SOD2-212ENST00000540491 TNPO3Q9Y5L0 923 aaKnown RBP17.71■□□□□ 0.43
SOD2-212ENST00000540491 A0A087X1B8 175 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 UBXN8O00124 270 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 FOXE1O00358 373 aaPredicted RBP17.7■□□□□ 0.42
SOD2-212ENST00000540491 SAP18O00422 153 aaKnown RBP17.7■□□□□ 0.42
SOD2-212ENST00000540491 EPPINO95925 133 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 NR2F6P10588 404 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 ENDOUP21128 410 aaKnown RBP17.7■□□□□ 0.42
SOD2-212ENST00000540491 TIMP3P35625 211 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 DLX5P56178 289 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 GPX6P59796 221 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 HERVK_113P63132 956 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 ERVK-8P63133 956 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 DDX39BQ13838 428 aaKnown RBP17.7■□□□□ 0.42
SOD2-212ENST00000540491 ZNF267Q14586 743 aaPredicted RBP17.7■□□□□ 0.42
SOD2-212ENST00000540491 SLMAPQ14BN4 828 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 EBPQ15125 230 aaKnown RBP17.7■□□□□ 0.42
SOD2-212ENST00000540491 KBTBD12Q3ZCT8 623 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 FBXL19-AS1Q494R0 122 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 C18orf63Q68DL7 685 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 CYP20A1Q6UW02 462 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 LIX1LQ8IVB5 337 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 TEX9Q8N6V9 391 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 PPM1NQ8N819 430 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 ZNF597Q96LX8 424 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 GAL3ST4Q96RP7 486 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 ERVK-6Q9BXR3 956 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 POLDIP3Q9BY77 421 aaKnown RBP17.7■□□□□ 0.42
SOD2-212ENST00000540491 KCNF1Q9H3M0 494 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 ACTR8Q9H981 624 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 PROK2Q9HC23 129 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 SPRR3Q9UBC9 169 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 MTRF1LQ9UGC7 380 aaKnown RBP17.7■□□□□ 0.42
SOD2-212ENST00000540491 CNOT11Q9UKZ1 510 aaKnown RBP17.7■□□□□ 0.42
SOD2-212ENST00000540491 ERVK-19Q9WJR5 959 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 UTP11Q9Y3A2 253 aaKnown RBP17.7■□□□□ 0.42
SOD2-212ENST00000540491 ASB4Q9Y574 426 aa17.7■□□□□ 0.42
SOD2-212ENST00000540491 ANKHD1Q8IWZ3 2542 aaKnown RBP17.7■□□□□ 0.42
SOD2-212ENST00000540491 A0A0A6YYD5 115 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 LRRC3CA6NJW4 275 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 SH3BGRLO75368 114 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 MTHFD2P13995 350 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 IST1P53990 364 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 ALDH18A1P54886 795 aaKnown RBP17.69■□□□□ 0.42
SOD2-212ENST00000540491 HNRNPH2P55795 449 aaKnown RBP17.69■□□□□ 0.42
SOD2-212ENST00000540491 NRG3P56975 720 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 DLG1Q12959 904 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 SETDB1Q15047 1291 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 ACAP2Q15057 778 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 RPS6KA2Q15349 733 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 PCBP2Q15366 365 aaKnown RBP eCLIP17.69■□□□□ 0.42
SOD2-212ENST00000540491 PRAMEF20Q5VT98 475 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 HLA-DQA1Q5Y7H0 255 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 KLC3Q6P597 504 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 MYLK4Q86YV6 388 aaPredicted RBP17.69■□□□□ 0.42
SOD2-212ENST00000540491 LACC1Q8IV20 430 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 C17orf47Q8NEP4 570 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 OR10G3Q8NGC4 313 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 FAM222BQ8WU58 562 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 SREK1Q8WXA9 508 aaKnown RBP17.69■□□□□ 0.42
SOD2-212ENST00000540491 MTERF1Q99551 399 aaKnown RBP17.69■□□□□ 0.42
SOD2-212ENST00000540491 DPH5Q9H2P9 285 aa17.69■□□□□ 0.42
SOD2-212ENST00000540491 C2orf92A0A1B0GVN3 265 aa17.68■□□□□ 0.42
SOD2-212ENST00000540491 TRIM3O75382 744 aaPredicted RBP17.68■□□□□ 0.42
SOD2-212ENST00000540491 SEMA3DO95025 777 aa17.68■□□□□ 0.42
SOD2-212ENST00000540491 GOSR1O95249 250 aa17.68■□□□□ 0.42
SOD2-212ENST00000540491 RFPL3SP0C7P2 107 aa17.68■□□□□ 0.42
SOD2-212ENST00000540491 FAM58BPP0C7Q3 252 aa17.68■□□□□ 0.42
SOD2-212ENST00000540491 CD99P14209 185 aa17.68■□□□□ 0.42
SOD2-212ENST00000540491 CEACAM8P31997 349 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms